RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
PSEN1-221ENST00000557293 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
PSEN1-221ENST00000557293 STK19P49842 368 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TAS2R38P59533 333 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 ECT2LQ008S8 904 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 STAT4Q14765 748 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 ISXQ2M1V0 245 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TRIM69Q86WT6 500 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 CFAP52Q8N1V2 620 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 CARNMT1Q8N4J0 409 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TMEM145Q8NBT3 493 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-221ENST00000557293 UBA3Q8TBC4 463 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 FRS2Q8WU20 508 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 KCTD13Q8WZ19 329 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 KLHDC7BQ96G42 594 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 FAXDC2Q96IV6 333 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 FCRL2Q96LA5 508 aaPredicted RBP12.98□□□□□ -0.33
PSEN1-221ENST00000557293 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 IMPG2Q9BZV3 1241 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 KDM4CQ9H3R0 1056 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 LRRC4Q9HBW1 653 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TSPAN16Q9UKR8 245 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
PSEN1-221ENST00000557293 TDRD6O60522 2096 aaKnown RBP12.97□□□□□ -0.33
PSEN1-221ENST00000557293 CDRT15L2A8MXV6 281 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 TERTO14746 1132 aaKnown RBP12.97□□□□□ -0.33
PSEN1-221ENST00000557293 PIAS2O75928 621 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 IL1BP01584 269 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 FYNP06241 537 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 TGM2P21980 687 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 NUDT1P36639 197 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 SLC11A2P49281 568 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 POM121L1PQ3SYA9 428 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 DCAF6Q58WW2 860 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 MS4A13Q5J8X5 152 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-221ENST00000557293 SLC39A13Q96H72 371 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 NUCKS1Q9H1E3 243 aaKnown RBP12.97□□□□□ -0.33
PSEN1-221ENST00000557293 ZSCAN16Q9H4T2 348 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-221ENST00000557293 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 SATB2Q9UPW6 733 aa12.97□□□□□ -0.33
PSEN1-221ENST00000557293 PRAMEF26H0Y7S4 382 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 FFAR2O15552 330 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 GP1BAP07359 652 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 THEGLP0DJG4 465 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 TBX4P57082 545 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 ENPEPQ07075 957 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 BST2Q10589 180 aaKnown RBP12.96□□□□□ -0.33
PSEN1-221ENST00000557293 CNTN1Q12860 1018 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 NUGGCQ68CJ6 796 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 EEF2KMTQ96G04 330 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 NOX5Q96PH1 765 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 TJP2Q9UDY2 1190 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 SERTAD1Q9UHV2 236 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 XPO7Q9UIA9 1087 aaKnown RBP12.96□□□□□ -0.33
PSEN1-221ENST00000557293 PPM1HQ9ULR3 514 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 FRMD4BQ9Y2L6 1034 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 ENTPD2Q9Y5L3 495 aa12.96□□□□□ -0.33
PSEN1-221ENST00000557293 K7ESM1 405 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 O00370 1275 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 SLC7A4O43246 635 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 LUC7L3O95232 432 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 LCP1P13796 627 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 ITGB6P18564 788 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 NUMBP49757 651 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 SLC8A3P57103 927 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 CLN3Q13286 438 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 NFIL3Q16649 462 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 PRICKLE2Q7Z3G6 844 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 TTC39CQ8N584 583 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 UBR7Q8N806 425 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 OR13H1Q8NG92 308 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 CLEC4CQ8WTT0 213 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 SLC35F5Q8WV83 523 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 KLK6Q92876 244 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 ALG14Q96F25 216 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 ATXN7L3BQ96GX2 97 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 IPO9Q96P70 1041 aaKnown RBP12.95□□□□□ -0.34
PSEN1-221ENST00000557293 ZSWIM1Q9BR11 485 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 MMRN2Q9H8L6 949 aa12.95□□□□□ -0.34
PSEN1-221ENST00000557293 NLGN3Q9NZ94 848 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms