RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OR6B2Q6IFH4 312 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 CCNI2Q6ZMN8 369 aaPredicted RBP16.39■□□□□ 0.21
TUBB3-213ENST00000557262 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
TUBB3-213ENST00000557262 SND1Q7KZF4 910 aaKnown RBP eCLIP16.39■□□□□ 0.21
TUBB3-213ENST00000557262 STK40Q8N2I9 435 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 OR2T34Q8NGX1 318 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 SKA1Q96BD8 255 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 ACE2Q9BYF1 805 aaPredicted RBP16.39■□□□□ 0.21
TUBB3-213ENST00000557262 COX16Q9P0S2 106 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
TUBB3-213ENST00000557262 FREM2Q5SZK8 3169 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 H0Y8X5 98 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 FOXN3O00409 490 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 VILLO15195 856 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 GRAP2O75791 330 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 ADH1BP00325 375 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 ATXN1LP0C7T5 689 aaKnown RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 MZF1P28698 734 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 KRT9P35527 623 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 MTIF2P46199 727 aaKnown RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 STK19P49842 368 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 CCT8P50990 548 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 CCR5P51681 352 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 TPD52L1Q16890 204 aaPredicted RBP16.38■□□□□ 0.21
TUBB3-213ENST00000557262 FBXL22Q6P050 247 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 LRSAM1Q6UWE0 723 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 LAYNQ6UX15 382 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 PASD1Q8IV76 773 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 EBF2Q9HAK2 575 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
TUBB3-213ENST00000557262 C10orf142B7Z368 130 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 IL1BP01584 269 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 NOS2P35228 1153 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 CLCN1P35523 988 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 GRK6P43250 576 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 PSMD8P48556 350 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 SLC6A3Q01959 620 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 SCAPQ12770 1279 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 AUHQ13825 339 aaKnown RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 ELAVL3Q14576 367 aaKnown RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 TMPRSS7Q7RTY8 843 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 CIR1Q86X95 450 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 OR14C36Q8NHC7 312 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 RPRD1AQ96P16 312 aaPredicted RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 SIX2Q9NPC8 291 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 TOR4AQ9NXH8 423 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 TPX2Q9ULW0 747 aaKnown RBP16.37■□□□□ 0.21
TUBB3-213ENST00000557262 FAM208BQ5VWN6 2430 aa16.37■□□□□ 0.21
TUBB3-213ENST00000557262 CABIN1Q9Y6J0 2220 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 TAF4O00268 1085 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 TNFSF14O43557 240 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 DKK1O94907 266 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 ERBB2P04626 1255 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 CD38P28907 300 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 NUMBP49757 651 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 BPIFB4P59827 614 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 NME3Q13232 169 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 ZNF177Q13360 481 aaPredicted RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 MAN2A1Q16706 1144 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 CXorf57Q6NSI4 855 aaKnown RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 OLFML1Q6UWY5 402 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 SLC26A9Q7LBE3 791 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 SLC47A2Q86VL8 602 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 C1orf131Q8NDD1 294 aaKnown RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 ZNF397Q8NF99 534 aaPredicted RBP16.36■□□□□ 0.21
TUBB3-213ENST00000557262 FRS2Q8WU20 508 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 ALG14Q96F25 216 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 SLC6A18Q96N87 628 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 FEM1AQ9BSK4 669 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 SYNCQ9H7C4 482 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 AASDHPPTQ9NRN7 309 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 VANGL2Q9ULK5 521 aa16.36■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3DA0A087WVF3 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3IA0A087WXS9 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3EA0A087X179 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3KA0A087X1G2 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 A0A1B0GTQ1 180 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3FA6NER0 549 aaPredicted RBP16.35■□□□□ 0.21
TUBB3-213ENST00000557262 GOLGA8CPA6NN73 597 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3LB9A6J9 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 M0QYT0 321 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 WNT1P04628 370 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3HP0C7X1 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 VAV1P15498 845 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 ADPRHP54922 357 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 C5orf22Q49AR2 442 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3GQ6DHY5 549 aa16.35■□□□□ 0.21
TUBB3-213ENST00000557262 TBC1D3CQ6IPX1 549 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms