RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 HINFPQ9BQA5 517 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 MKRN2Q9H000 416 aaKnown RBP23.52■■□□□ 1.36
TDP1-216ENST00000556867 MPP6Q9NZW5 540 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 PPARGC1AQ9UBK2 798 aaKnown RBP23.52■■□□□ 1.36
TDP1-216ENST00000556867 ERVW-1Q9UQF0 538 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 OR51B4Q9Y5P0 310 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 THADAQ6YHU6 1953 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 A0A087X0T9 212 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 TMEM191CA6NGB0 347 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 AP5Z1O43299 807 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 ZNF217O75362 1048 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 TPM1P09493 284 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 FAM228BP0C875 321 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 CTSOP43234 321 aaPredicted RBP23.51■■□□□ 1.35
TDP1-216ENST00000556867 COPAP53621 1224 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 ELF2Q15723 593 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 SETD3Q86TU7 594 aaPredicted RBP23.51■■□□□ 1.35
TDP1-216ENST00000556867 METTL3Q86U44 580 aaKnown RBP23.51■■□□□ 1.35
TDP1-216ENST00000556867 DCLK2Q8N568 766 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 ZNF366Q8N895 744 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 OR2T3Q8NH03 318 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 FNIP1Q8TF40 1166 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 FEM1AQ9BSK4 669 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 ZYG11BQ9C0D3 744 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 SLC6A17Q9H1V8 727 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 FBRSQ9HAH7 460 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 PRDM16Q9HAZ2 1276 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 ZNF212Q9UDV6 495 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 OR12D3Q9UGF7 316 aa23.51■■□□□ 1.35
TDP1-216ENST00000556867 RALGAPA1Q6GYQ0 2036 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 SRGAP2O75044 1071 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 RHOBTB1O94844 696 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 RHOCP08134 193 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 C7P10643 843 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 BCKDHBP21953 392 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 PSMA2P25787 234 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 PMS2CLQ68D20 193 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 KIAA1324Q6UXG2 1013 aaKnown RBP23.5■■□□□ 1.35
TDP1-216ENST00000556867 SLFN11Q7Z7L1 901 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 RBSNQ9H1K0 784 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 MRPL47Q9HD33 250 aaKnown RBP23.5■■□□□ 1.35
TDP1-216ENST00000556867 SUN2Q9UH99 717 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 NENFQ9UMX5 172 aa23.5■■□□□ 1.35
TDP1-216ENST00000556867 NYNRINQ9P2P1 1898 aaKnown RBP23.49■■□□□ 1.35
TDP1-216ENST00000556867 MFAP3LO75121 409 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 EPN2O95208 641 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 VASPP50552 380 aaPredicted RBP23.49■■□□□ 1.35
TDP1-216ENST00000556867 AIF1P55008 147 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 ZNF252P-AS1Q0IIN9 211 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 HNRNPA1L2Q32P51 320 aaKnown RBP23.49■■□□□ 1.35
TDP1-216ENST00000556867 C6orf118Q5T5N4 469 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 RNF219Q5W0B1 726 aaPredicted RBP23.49■■□□□ 1.35
TDP1-216ENST00000556867 SCYL2Q6P3W7 929 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 TFAP2DQ7Z6R9 452 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 TMPRSS6Q8IU80 811 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 TRIM5Q9C035 493 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 RETREG1Q9H6L5 497 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 PRSS16Q9NQE7 514 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 MBD1Q9UIS9 605 aaPredicted RBP23.49■■□□□ 1.35
TDP1-216ENST00000556867 VPS28Q9UK41 221 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 NEU3Q9UQ49 428 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 CFAP54Q96N23 3096 aa23.49■■□□□ 1.35
TDP1-216ENST00000556867 FAM72CH0Y354 149 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 LRP3O75074 770 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 LRIG2O94898 1065 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 EIF4A3P38919 411 aaKnown RBP23.48■■□□□ 1.35
TDP1-216ENST00000556867 EFHC2Q5JST6 749 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 FAM72AQ5TYM5 149 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 FAM72DQ6L9T8 149 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 ALKBH5Q6P6C2 394 aaKnown RBP23.48■■□□□ 1.35
TDP1-216ENST00000556867 FAM72BQ86X60 149 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 FRMD1Q8N878 549 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 PRCCQ92733 491 aaPredicted RBP23.48■■□□□ 1.35
TDP1-216ENST00000556867 SIPA1Q96FS4 1042 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 TRIM7Q9C029 511 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 MUC3BQ9H195 1237 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 ABHD10Q9NUJ1 306 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 ZNHIT6Q9NWK9 470 aaKnown RBP23.48■■□□□ 1.35
TDP1-216ENST00000556867 USP36Q9P275 1121 aaKnown RBP23.48■■□□□ 1.35
TDP1-216ENST00000556867 MYO1AQ9UBC5 1043 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 FZD10Q9ULW2 581 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 CHD5Q8TDI0 1954 aa23.48■■□□□ 1.35
TDP1-216ENST00000556867 NUP205Q92621 2012 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 IGHV1OR15-9A0A0B4J2B8 117 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 SSU72P8A0A1W2PR75 194 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 OR1E1P30953 314 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 L1CAMP32004 1257 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 STK19P49842 368 aaPredicted RBP23.47■■□□□ 1.35
TDP1-216ENST00000556867 TBX2Q13207 712 aaPredicted RBP23.47■■□□□ 1.35
TDP1-216ENST00000556867 MAPK8IP2Q13387 824 aaPredicted RBP23.47■■□□□ 1.35
TDP1-216ENST00000556867 SLC36A4Q6YBV0 504 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 ZNF783Q6ZMS7 281 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 GPR161Q8N6U8 529 aaKnown RBP23.47■■□□□ 1.35
TDP1-216ENST00000556867 TBC1D31Q96DN5 1066 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 RPL10LQ96L21 214 aaKnown RBP23.47■■□□□ 1.35
TDP1-216ENST00000556867 PSMB7Q99436 277 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 MAGEB5Q9BZ81 275 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 THAP2Q9H0W7 228 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 SLCO3A1Q9UIG8 710 aa23.47■■□□□ 1.35
TDP1-216ENST00000556867 CYP8B1Q9UNU6 501 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms