RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 TERB1Q8NA31 727 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 EXD1Q8NHP7 514 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 PCDH19Q8TAB3 1148 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 FAM71BQ8TC56 605 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 FOXQ1Q9C009 403 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 TBC1D17Q9HA65 648 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 ETNK2Q9NVF9 386 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 FBXO10Q9UK96 956 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 TBC1D30Q9Y2I9 924 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 MRPS17Q9Y2R5 130 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 MFHAS1Q9Y4C4 1052 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 VCANP13611 3396 aa14.42□□□□□ -0.1
VIPAS39-208ENST00000556412 EGFP01133 1207 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 KRT10P13645 584 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 OXCT1P55809 520 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 FUT11Q495W5 492 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 RNF43Q68DV7 783 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 IL31Q6EBC2 164 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 FSTL4Q6MZW2 842 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 AADACL2Q6P093 401 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 TRIM67Q6ZTA4 783 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 APCDD1Q8J025 514 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 AHI1Q8N157 1196 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 OR7D4Q8NG98 312 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 HEMGNQ9BXL5 484 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 SLC27A6Q9Y2P4 619 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 COL4A3Q01955 1670 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 A0A0D9SEW6 157 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 KANSL1LA0AUZ9 987 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 SHISA7A6NL88 538 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 PRRT4C9JH25 899 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 DFFAO00273 331 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 KCNK3O14649 394 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 PYGMP11217 842 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 CETN2P41208 172 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 CDKN2BP42772 138 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 STARD6P59095 220 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 GNA12Q03113 381 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 POLD3Q15054 466 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 PITRM1Q5JRX3 1037 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 PHTF2Q8N3S3 785 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 CCDC33Q8N5R6 958 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 NPWQ8N729 165 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 RNF157Q96PX1 679 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 LTB4R2Q9NPC1 389 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 RBM12Q9NTZ6 932 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 DONSONQ9NYP3 566 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 MTF2Q9Y483 593 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 JRKLQ9Y4A0 524 aa14.41□□□□□ -0.1
VIPAS39-208ENST00000556412 ILVBLA1L0T0 632 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 WASH4PA8MWX3 477 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 APOL1O14791 398 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 DCLK1O15075 740 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 MAP3K6O95382 1288 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 POLR2EP19388 210 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 DRD1P21728 446 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 TARSP26639 723 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 ACVRL1P37023 503 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 PLEKHG6Q3KR16 790 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 TFDP3Q5H9I0 405 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 CCDC181Q5TID7 509 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 MBLAC2Q68D91 279 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 SUGP1Q8IWZ8 645 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 WFIKKN2Q8TEU8 576 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 SORCS1Q8WY21 1168 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 FAF2Q96CS3 445 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 FEM1AQ9BSK4 669 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 TLR10Q9BXR5 811 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 RETREG1Q9H6L5 497 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 ATP13A1Q9HD20 1204 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 ZDHHC4Q9NPG8 344 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 KCND1Q9NSA2 647 aa14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 INTS6Q9UL03 887 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-208ENST00000556412 hCG_1818297A0A087WSY0 165 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 ANTXRLA6NF34 631 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 RASA4BC9J798 803 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 TNFRSF10AO00220 468 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 CBX4O00257 560 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 RASA4O43374 803 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 ATP1A1P05023 1023 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 CXCR5P32302 372 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 SERPINB6P35237 376 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 SLC12A1Q13621 1099 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 DCAF12L1Q5VU92 463 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 NCBP2-AS2Q69YL0 99 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 ADIPOR2Q86V24 386 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 EZH1Q92800 747 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 HMCESQ96FZ2 354 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 LMLNQ96KR4 655 aa14.39□□□□□ -0.11
VIPAS39-208ENST00000556412 HEY1Q9Y5J3 304 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms