RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PLEKHD1A6NEE1 506 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 C3orf70A6NLC5 250 aaPredicted RBP5.65□□□□□ -1.5
PRPF39-209ENST00000556353 NBPF7P0C2Y1 421 aaPredicted RBP5.65□□□□□ -1.5
PRPF39-209ENST00000556353 HSPA7P48741 367 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 AK2P54819 239 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 MPEG1Q2M385 716 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 ADHFE1Q8IWW8 467 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 ADGRF3Q8IZF5 1079 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 PARD3BQ8TEW8 1205 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 WDR60Q8WVS4 1066 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 CCDC136Q96JN2 1154 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 CCDC138Q96M89 665 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 SLC52A1Q9NWF4 448 aa5.65□□□□□ -1.5
PRPF39-209ENST00000556353 ZNF142P52746 1687 aaPredicted RBP5.65□□□□□ -1.51
PRPF39-209ENST00000556353 MLH3Q9UHC1 1453 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 AGLP35573 1532 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 MYO3AQ8NEV4 1616 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 GTPBP1O00178 669 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 IFNA2P01563 188 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 ALDOCP09972 364 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 ALDH18A1P54886 795 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 SHC2P98077 582 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 TLE3Q04726 772 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 CCDC181Q5TID7 509 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 HMBOX1Q6NT76 420 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 TMEM88Q6PEY1 159 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 TRABD2AQ86V40 505 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 OR4N4Q8N0Y3 316 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 REXO5Q96IC2 774 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 ZNF479Q96JC4 524 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 SF3B5Q9BWJ5 86 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 SPAG4Q9NPE6 437 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 SLC39A10Q9ULF5 831 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 NFU1Q9UMS0 254 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 PCDHGB2Q9Y5G2 931 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 CKAP5Q14008 2032 aa5.64□□□□□ -1.51
PRPF39-209ENST00000556353 GPATCH8Q9UKJ3 1502 aaKnown RBP5.64□□□□□ -1.51
PRPF39-209ENST00000556353 RPS10-NUDT3A0A1W2PQS6 291 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 FOXO6A8MYZ6 492 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 PRR23D1E9PI22 279 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-209ENST00000556353 M0QYT0 321 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 TNFRSF13BO14836 293 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-209ENST00000556353 MDM4O15151 490 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 NGFRP08138 427 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 PRR23D2P0DMB1 279 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-209ENST00000556353 IGFBP2P18065 325 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 ARRB2P32121 409 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 GNALP38405 381 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 TAS2R50P59544 299 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 ZXDBP98169 803 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 C10orf76Q5T2E6 689 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 ASPHD1Q5U4P2 390 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 RINT1Q6NUQ1 792 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 PDXDC1Q6P996 788 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 FBXL14Q8N1E6 418 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 IPO4Q8TEX9 1081 aaKnown RBP5.63□□□□□ -1.51
PRPF39-209ENST00000556353 NTPCRQ9BSD7 190 aaKnown RBP5.63□□□□□ -1.51
PRPF39-209ENST00000556353 MYLK2Q9H1R3 596 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 TNFSF13BQ9Y275 285 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 CLIP1P30622 1438 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 ATP7AQ04656 1500 aa5.63□□□□□ -1.51
PRPF39-209ENST00000556353 PLA2G6O60733 806 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 RPP40O75818 363 aaKnown RBP5.62□□□□□ -1.51
PRPF39-209ENST00000556353 TGFB3P10600 412 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 NPPBP16860 134 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 GRK5P34947 590 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 HSPA2P54652 639 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 RPL15P61313 204 aaKnown RBP5.62□□□□□ -1.51
PRPF39-209ENST00000556353 GALNT3Q14435 633 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 ZNF585BQ52M93 769 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 DGKKQ5KSL6 1271 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 NRSN1Q8IZ57 195 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 AFAP1Q8N556 730 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 KAT2AQ92830 837 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 KIAA1191Q96A73 305 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 STK33Q9BYT3 514 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 ARHGAP39Q9C0H5 1083 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 OSBPL5Q9H0X9 879 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-209ENST00000556353 CCDC134Q9H6E4 229 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 GEMIN8Q9NWZ8 242 aaKnown RBP5.62□□□□□ -1.51
PRPF39-209ENST00000556353 RAB21Q9UL25 225 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 PHTF1Q9UMS5 762 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 SLC12A4Q9UP95 1085 aa5.62□□□□□ -1.51
PRPF39-209ENST00000556353 ARID4BQ4LE39 1312 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-209ENST00000556353 CXorf65A6NEN9 183 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 PIP5K1BO14986 540 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 SLC28A2O43868 658 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 CYP3A4P08684 503 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 KLRK1P26718 216 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 AKT1P31749 480 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 FOXL2P58012 376 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 PMPCAQ10713 525 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 PICALMQ13492 652 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 ZNF569Q5MCW4 686 aa5.61□□□□□ -1.51
PRPF39-209ENST00000556353 EHBP1L1Q8N3D4 1523 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms