RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LONRF1Q17RB8 773 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 DNAJC21Q5F1R6 531 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 FNBP1LQ5T0N5 605 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 HEATR6Q6AI08 1181 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 CYS1Q717R9 158 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 MON1AQ86VX9 555 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 NPAS4Q8IUM7 802 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ZBED8Q8IZ13 594 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 VPS52Q8N1B4 723 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 NUP93Q8N1F7 819 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 UHMK1Q8TAS1 419 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 DQX1Q8TE96 717 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 HASPINQ8TF76 798 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 C2orf15Q8WU43 125 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ARHGEF2Q92974 986 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 SPATA13Q96N96 652 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 TMEM209Q96SK2 561 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 RHOBTB2Q9BYZ6 727 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 SMOC2Q9H3U7 446 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 FBXO44Q9H4M3 255 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ACSS3Q9H6R3 686 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 WDCPQ9H6R7 721 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 XAB2Q9HCS7 855 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ANLNQ9NQW6 1124 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 EIF2B3Q9NR50 452 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ETNK2Q9NVF9 386 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 DNAJC17Q9NVM6 304 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 SENP1Q9P0U3 644 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 GGA2Q9UJY4 613 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ADAM28Q9UKQ2 775 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 PCDHB5Q9Y5E4 795 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 TEX264Q9Y6I9 313 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 CLUHO75153 1309 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 EXOC1LA0A1B0GW35 172 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 TCRBV7S3A2A0A539 114 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 GMNCA6NCL1 334 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 F8W810 466 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 I6L893 689 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 IRAK2O43187 625 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 FAM155BO75949 473 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 FAM107AO95990 144 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 CCL5P13501 91 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 ERCC2P18074 760 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 GCAP28676 217 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 HOXC13P31276 330 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 RFC2P35250 354 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 ADH7P40394 386 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SLCO1A2P46721 670 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SLC5A3P53794 718 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 GEMIN4P57678 1058 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 TPI1P60174 286 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 BASP1P80723 227 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SARNPP82979 210 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 GPR17Q13304 367 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 FASTKD3Q14CZ7 662 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 PARP6Q2NL67 630 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 KLHL38Q2WGJ6 581 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SLC39A12Q504Y0 691 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 ACBD5Q5T8D3 534 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF280DQ6N043 979 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 MSANTD2Q6P1R3 559 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SLC39A5Q6ZMH5 540 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 C3orf62Q6ZUJ4 267 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SCD5Q86SK9 330 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 TAC4Q86UU9 113 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 PALM2Q8IXS6 379 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF276Q8N554 614 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SCAMP5Q8TAC9 235 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 CCDC110Q8TBZ0 833 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 EDEM1Q92611 657 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 GLMNQ92990 594 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SPATA17Q96L03 361 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 C1orf74Q96LT6 269 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 DEFB118Q96PH6 123 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 XPO6Q96QU8 1125 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 VAT1Q99536 393 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 WDR83Q9BRX9 315 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 SSU72Q9NP77 194 aaKnown RBP8.53□□□□□ -1.04
ATXN3-235ENST00000556082 C11orf16Q9NQ32 467 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 CLIC5Q9NZA1 410 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 FNIP2Q9P278 1114 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 DNAJB4Q9UDY4 337 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 OR12D3Q9UGF7 316 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 STARD13Q9Y3M8 1113 aa8.53□□□□□ -1.04
ATXN3-235ENST00000556082 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.04
ATXN3-235ENST00000556082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CARNS1A5YM72 827 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 SMIM23A6NLE4 172 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 KCNU1A8MYU2 1149 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 FAM72CH0Y354 149 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 GOLGA8MH3BSY2 632 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 CREB3O43889 395 aa8.52□□□□□ -1.05
ATXN3-235ENST00000556082 MFSD11O43934 449 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms