RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 UBALD2Q8IYN6 164 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 BHMTQ93088 406 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 P2RY11Q96G91 374 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 HEMGNQ9BXL5 484 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 KLC2Q9H0B6 622 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 DEC1Q9P2X7 70 aa12.8□□□□□ -0.36
SHMT2-221ENST00000555773 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-221ENST00000555773 COL6A3P12111 3177 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 C5orf42Q9H799 3197 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 A0A0A0MRY4 1105 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 FANCGO15287 622 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 TIMM44O43615 452 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 RAMP2O60895 175 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 TULP3O75386 442 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 SLC34A2O95436 690 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 APOC2P02655 101 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 FGGP02679 453 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 RHOCP08134 193 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 MX2P20592 715 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 DGKGP49619 791 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 GNA12Q03113 381 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 POLD3Q15054 466 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 NCBP2-AS2Q69YL0 99 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 CXorf57Q6NSI4 855 aaKnown RBP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 KIAA0907Q7Z7F0 614 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 NAT16Q8N8M0 369 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 P3H4Q92791 437 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 LMLNQ96KR4 655 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 PNKPQ96T60 521 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 BRD8Q9H0E9 1235 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 LRRC19Q9H756 370 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 HOMER3Q9NSC5 361 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 NDFIP2Q9NV92 336 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 ETNK2Q9NVF9 386 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
SHMT2-221ENST00000555773 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 CLEC4EQ9ULY5 219 aa12.79□□□□□ -0.36
SHMT2-221ENST00000555773 CXorf51AA0A1B0GTR3 108 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 RASA4BC9J798 803 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 SPECC1L-ADORA2AF8WAN1 911 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 MAN2B1O00754 1011 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 RASA4O43374 803 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
SHMT2-221ENST00000555773 HLA-FP30511 346 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 OPRD1P41143 372 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 GRIA2P42262 883 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 PAFAH1B1P43034 410 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 SLC6A11P48066 632 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 KLF1Q13351 362 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-221ENST00000555773 PDK1Q15118 436 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 LLGL1Q15334 1064 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 FSCBQ5H9T9 825 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-221ENST00000555773 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 WFIKKN2Q8TEU8 576 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 FEM1AQ9BSK4 669 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 ACE2Q9BYF1 805 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-221ENST00000555773 MUC3BQ9H195 1237 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
SHMT2-221ENST00000555773 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 DTLQ9NZJ0 730 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 GGA2Q9UJY4 613 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 PIAS3Q9Y6X2 628 aa12.78□□□□□ -0.36
SHMT2-221ENST00000555773 PGRMC1O00264 195 aaKnown RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 PABPC1P11940 636 aaKnown RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 CTHP32929 405 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 PAPOLAP51003 745 aaKnown RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 GALK1P51570 392 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 DYNLT1P63172 113 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 GBE1Q04446 702 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 PRKCQQ04759 706 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SULT2A1Q06520 285 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF33AQ06730 810 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 GALNT2Q10471 571 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 LMAN2Q12907 356 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 XRCC4Q13426 336 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SERINC3Q13530 473 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 E2F5Q15329 346 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 PLEKHG6Q3KR16 790 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 C12orf40Q86WS4 652 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms