RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RPL22P35268 128 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 TNNT3P45378 269 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 PLTPP55058 493 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ZXDBP98169 803 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 MLLT1Q03111 559 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 GALNT2Q10471 571 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 PRKD1Q15139 912 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 P3H1Q32P28 736 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ARTNQ5T4W7 220 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 IZUMO3Q5VZ72 239 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ANKRD54Q6NXT1 300 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 FBXO38Q6PIJ6 1188 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 Q6ZNB5 142 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 EP400NLQ6ZTU2 488 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 HTR3DQ70Z44 454 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 NLRP14Q86W24 1093 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ARHGAP12Q8IWW6 846 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ATPAF2Q8N5M1 289 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ITFG1Q8TB96 612 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 DEPDC1BQ8WUY9 529 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 HTR3CQ8WXA8 447 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC39A8Q9C0K1 460 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 KLC2Q9H0B6 622 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 USP29Q9HBJ7 922 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 WHRNQ9P202 907 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 PAK5Q9P286 719 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 NEU2Q9Y3R4 380 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 C2orf16Q68DN1 1984 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 SHROOM3Q8TF72 1996 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 MYO7AQ13402 2215 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 CEP290O15078 2479 aa9.91□□□□□ -0.82
HNRNPC-220ENST00000555585 NYNRINQ9P2P1 1898 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 E2F8A0AVK6 867 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ARHGAP42A6NI28 874 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 RASA4BC9J798 803 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 NDC80O14777 642 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 RASA4O43374 803 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TBL1XO60907 577 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CLDN11O75508 207 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 SEC31AO94979 1220 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 GLP2RO95838 553 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 GARSP41250 739 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 MAPKAPK2P49137 400 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 PAPOLAP51003 745 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 SGSHP51688 502 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 NDST2P52849 883 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ITGA8P53708 1063 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 NRLP54845 237 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CDH4P55283 916 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 RPS24P62847 133 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 PPIDQ08752 370 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ZNF177Q13360 481 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ADAM15Q13444 863 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CBX2Q14781 532 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 LRIT3Q3SXY7 679 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 C5orf22Q49AR2 442 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 FAM182AQ5T1J6 154 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TTC39BQ5VTQ0 682 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ARHGEF18Q6ZSZ5 1173 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 GPR149Q86SP6 731 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 BBS7Q8IWZ6 715 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 UMODL1-AS1Q8N2C9 162 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CCDC110Q8TBZ0 833 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 USP13Q92995 863 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 HDAC11Q96DB2 347 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TMA16Q96EY4 203 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ZSWIM3Q96MP5 696 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 PRICKLE1Q96MT3 831 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 NEUROG2Q9H2A3 272 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 RETREG1Q9H6L5 497 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 ARFGAP3Q9NP61 516 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TDP1Q9NUW8 608 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 STOML2Q9UJZ1 356 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 TPX2Q9ULW0 747 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CCL26Q9Y258 94 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 NUP205Q92621 2012 aa9.9□□□□□ -0.82
HNRNPC-220ENST00000555585 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 NUP210Q8TEM1 1887 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 A0A1B0GVM2 712 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 A0A1W2PPC1 479 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 TCAF2A6NFQ2 919 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 C5orf60A6NFR6 353 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 H0Y626 953 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 RNF103O00237 685 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 MTSS1O43312 755 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 GREM1O60565 184 aa9.89□□□□□ -0.83
HNRNPC-220ENST00000555585 RAMP2O60895 175 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms