RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 BRI3BPQ8WY22 251 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 IP6K1Q92551 441 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 MCRS1Q96EZ8 462 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 NAA15Q9BXJ9 866 aaKnown RBP4.01□□□□□ -1.77
SNX6-204ENST00000555541 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNX6-204ENST00000555541 PCDHB7Q9Y5E2 793 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 LOC105369274A0A096LPK9 316 aa4□□□□□ -1.77
SNX6-204ENST00000555541 LOC102723532A0A0G2JNH3 316 aa4□□□□□ -1.77
SNX6-204ENST00000555541 KCNJ18B7U540 433 aa4□□□□□ -1.77
SNX6-204ENST00000555541 M0QYT0 321 aa4□□□□□ -1.77
SNX6-204ENST00000555541 NCK2O43639 380 aa4□□□□□ -1.77
SNX6-204ENST00000555541 LDB3O75112 727 aa4□□□□□ -1.77
SNX6-204ENST00000555541 ITGA5P08648 1049 aa4□□□□□ -1.77
SNX6-204ENST00000555541 SRGAP2BP0DMP2 458 aa4□□□□□ -1.77
SNX6-204ENST00000555541 FOXL2P58012 376 aa4□□□□□ -1.77
SNX6-204ENST00000555541 PMPCAQ10713 525 aa4□□□□□ -1.77
SNX6-204ENST00000555541 COASYQ13057 564 aa4□□□□□ -1.77
SNX6-204ENST00000555541 TRAF3Q13114 568 aa4□□□□□ -1.77
SNX6-204ENST00000555541 CBFBQ13951 182 aa4□□□□□ -1.77
SNX6-204ENST00000555541 IZUMO4Q1ZYL8 232 aa4□□□□□ -1.77
SNX6-204ENST00000555541 SLC35G1Q2M3R5 365 aa4□□□□□ -1.77
SNX6-204ENST00000555541 FNBP1LQ5T0N5 605 aa4□□□□□ -1.77
SNX6-204ENST00000555541 DCAF12L2Q5VW00 463 aa4□□□□□ -1.77
SNX6-204ENST00000555541 SPSB3Q6PJ21 355 aa4□□□□□ -1.77
SNX6-204ENST00000555541 KRT27Q7Z3Y8 459 aa4□□□□□ -1.77
SNX6-204ENST00000555541 DPP9Q86TI2 863 aa4□□□□□ -1.77
SNX6-204ENST00000555541 OR4N4Q8N0Y3 316 aa4□□□□□ -1.77
SNX6-204ENST00000555541 CADM3Q8N126 398 aa4□□□□□ -1.77
SNX6-204ENST00000555541 SRFBP1Q8NEF9 429 aaKnown RBP4□□□□□ -1.77
SNX6-204ENST00000555541 C8orf48Q96LL4 319 aa4□□□□□ -1.77
SNX6-204ENST00000555541 DDX31Q9H8H2 851 aaKnown RBP4□□□□□ -1.77
SNX6-204ENST00000555541 ZNF304Q9HCX3 659 aa4□□□□□ -1.77
SNX6-204ENST00000555541 FBXO28Q9NVF7 368 aa4□□□□□ -1.77
SNX6-204ENST00000555541 CA14Q9ULX7 337 aa4□□□□□ -1.77
SNX6-204ENST00000555541 UBE2J1Q9Y385 318 aaPredicted RBP4□□□□□ -1.77
SNX6-204ENST00000555541 DTNAQ9Y4J8 743 aa4□□□□□ -1.77
SNX6-204ENST00000555541 TRBV5-7A0A0A0MS05 114 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 J3KTA2 159 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 NKX2-8O15522 239 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 LINC01565O15544 149 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 FGF18O76093 207 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 PARNO95453 639 aaKnown RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 CGAP01215 116 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 UMODP07911 640 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 TNFSF4P23510 183 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 KCNJ4P48050 445 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 DLX5P56178 289 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 EEF1A2Q05639 463 aaKnown RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 GPR18Q14330 331 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 CSHL1Q14406 222 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 FAM209BQ5JX69 171 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 Q6ZSV7 163 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 ZNF367Q7RTV3 350 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 RASGRP3Q8IV61 690 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 PJA1Q8NG27 643 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 POLDIP3Q9BY77 421 aaKnown RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 SFXN1Q9H9B4 322 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 PNRC2Q9NPJ4 139 aaKnown RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 CHPF2Q9P2E5 772 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 MAGED2Q9UNF1 606 aaPredicted RBP3.99□□□□□ -1.77
SNX6-204ENST00000555541 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
SNX6-204ENST00000555541 KIF26BQ2KJY2 2108 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 RASA4BC9J798 803 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 KIF3BO15066 747 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 RASA4O43374 803 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 LCKP06239 509 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 ALDOCP09972 364 aaKnown RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 CHRNB2P17787 502 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 TCEA1P23193 301 aaKnown RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 EEF1GP26641 437 aaKnown RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 TM4SF4P48230 202 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 ZP1P60852 638 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 SEC61A1P61619 476 aaKnown RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 POU5F1BQ06416 359 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 ILF3Q12906 894 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNX6-204ENST00000555541 PKP1Q13835 747 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 AAK1Q2M2I8 961 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 WDR93Q6P2C0 686 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 FBXO38Q6PIJ6 1188 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 MUC20Q8N307 709 aaPredicted RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 NEXN-AS1Q8NBZ9 246 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNX6-204ENST00000555541 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 FRMD8Q9BZ67 464 aaPredicted RBP3.98□□□□□ -1.77
SNX6-204ENST00000555541 NECTIN3Q9NQS3 549 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 FZD10Q9ULW2 581 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 SLC8A2Q9UPR5 921 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 RAI2Q9Y5P3 530 aa3.98□□□□□ -1.77
SNX6-204ENST00000555541 PNMA6EA0A0J9YXQ4 647 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 ANO9A1A5B4 782 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 PCDH17O14917 1159 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 NTSR2O95665 410 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 MYL3P08590 195 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 FCGR1AP12314 374 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 PEPDP12955 493 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 TNFSF8P32971 234 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 SLC16A2P36021 539 aa3.97□□□□□ -1.77
SNX6-204ENST00000555541 CLCN5P51795 746 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms