RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ANKRD18B	A2A2Z9	1011 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	TSPAN4	O14817	238 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	CNTN5	O94779	1100 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	NUDT3	O95989	172 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	HSP90AA1	P07900	732 aa	Known RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ALDOC	P09972	364 aa	Known RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ARSA	P15289	507 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	SHC2	P98077	582 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	PRKG2	Q13237	762 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	LARS2	Q15031	903 aa	Known RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	GXYLT1	Q4G148	440 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	GLE1	Q53GS7	698 aa	Known RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	SLC45A4	Q5BKX6	768 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	FAM69A	Q5T7M9	428 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	TMEM65	Q6PI78	240 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	DCDC5	Q6ZRR9	648 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ADGRG6	Q86SQ4	1221 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	SCN4B	Q8IWT1	228 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ZNF366	Q8N895	744 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ANKRD52	Q8NB46	1076 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	NFKBID	Q8NI38	313 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	ELP4	Q96EB1	424 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	DAZAP1	Q96EP5	407 aa	Known RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	HIC2	Q96JB3	615 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	BBC3	Q96PG8	261 aa	Predicted RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	TREX2	Q9BQ50	279 aa	Predicted RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	HDHD5	Q9BXW7	423 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	PDCL3	Q9H2J4	239 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	BEX4	Q9NWD9	120 aa	Predicted RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	PPP1R14D	Q9NXH3	145 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	NAALADL1	Q9UQQ1	740 aa		4.78	□□□□□ -1.64
KTN1-222	ENST00000555506	GOLGA6L10	A0A0M3HER8	536 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	GAGE10	A6NGK3	116 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506		H7C1Q1	480 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	DSCR3	O14972	297 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	CCNT1	O60563	726 aa	Known RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	CYP4B1	P13584	511 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	PKM	P14618	531 aa	Known RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	CHM	P24386	653 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	HNF1B	P35680	557 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	POLD2	P49005	469 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	VPS41	P49754	854 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	ZNF84	P51523	738 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	SIM1	P81133	766 aa	Predicted RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	ARHGAP8	P85298	464 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	DMWD	Q09019	674 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TDG	Q13569	410 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	FAM153C	Q494X1	144 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	SPATA1	Q5VX52	437 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	CEP85	Q6P2H3	762 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	MTFR2	Q6P444	385 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	INO80C	Q6PI98	192 aa	Predicted RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	SLC22A25	Q6T423	547 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	VSTM1	Q6UX27	236 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TRIM72	Q6ZMU5	477 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TMTC3	Q6ZXV5	915 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	FASTKD5	Q7L8L6	764 aa	Known RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	GALNT7	Q86SF2	657 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TICAM2	Q86XR7	235 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	RASAL3	Q86YV0	1011 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	ATP2A3	Q93084	1043 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	FYTTD1	Q96QD9	318 aa	Known RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TRIM2	Q9C040	744 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	RIOX1	Q9H6W3	641 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	VEZT	Q9HBM0	779 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	SLC25A13	Q9UJS0	675 aa		4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	LAS1L	Q9Y4W2	734 aa	Known RBP	4.77	□□□□□ -1.65
KTN1-222	ENST00000555506	TCRBV5S1A1T	A0A578	114 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	DYTN	A2CJ06	578 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	PI4KAP2	A4QPH2	592 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	BTBD19	C9JJ37	291 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506		K7ENM7	598 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	MGST3	O14880	152 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	ZBED4	O75132	1171 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	RFPL3S	P0C7P2	107 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	HOXB9	P17482	250 aa	Predicted RBP	4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	PTH2R	P49190	550 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	RARRES1	P49788	294 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	CLNS1A	P54105	237 aa	Known RBP	4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	OAZ1	P54368	228 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	ADPRH	P54922	357 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	NAP1L1	P55209	391 aa	Known RBP	4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	CDH15	P55291	814 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	HOXA4	Q00056	320 aa	Predicted RBP	4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	PTP4A2	Q12974	167 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	SLC14A1	Q13336	389 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	ERV3-1	Q14264	604 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	NAA25	Q14CX7	972 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	ZNF766	Q5HY98	468 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	SH2D4B	Q5SQS7	431 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	ITPRIPL1	Q6GPH6	555 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	BRSK2	Q8IWQ3	736 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	VPS52	Q8N1B4	723 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	EXD3	Q8N9H8	876 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	TNIP2	Q8NFZ5	429 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	RUFY2	Q8WXA3	655 aa		4.76	□□□□□ -1.65
KTN1-222	ENST00000555506	NCSTN	Q92542	709 aa		4.76	□□□□□ -1.65

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