RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 OGDHQ02218 1023 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 BYSLQ13895 437 aaKnown RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SF3A2Q15428 464 aaKnown RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PPP1R15BQ5SWA1 713 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM72AQ5TYM5 149 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM72DQ6L9T8 149 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DNAJC24Q6P3W2 148 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LRRC31Q6UY01 552 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TFAP2DQ7Z6R9 452 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM72BQ86X60 149 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZNF557Q8N988 423 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 OR2T3Q8NH03 318 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SIPA1Q96FS4 1042 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MCEEQ96PE7 176 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ITM2CQ9NQX7 267 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SUN2Q9UH99 717 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
TRAPPC6B-205ENST00000555269 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.36
TRAPPC6B-205ENST00000555269 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 CCP110O43303 1012 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 GDF9O60383 454 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ZNF217O75362 1048 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 CLDN11O75508 207 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ASLP04424 464 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 GYPCP04921 128 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 GZMAP12544 262 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 VAV1P15498 845 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TPMTP51580 245 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ST8SIA6P61647 398 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ZBED6P86452 979 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 RPL6Q02878 288 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 MTA1Q13330 715 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 E2F5Q15329 346 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 CSRP2Q16527 193 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 C9orf64Q5T6V5 341 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TTC39BQ5VTQ0 682 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TCEAL6Q6IPX3 200 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SCYL2Q6P3W7 929 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 DCUN1D2Q6PH85 259 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 LPCAT2Q7L5N7 544 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 STRADAQ7RTN6 431 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 FAM124AQ86V42 546 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TCEAL3Q969E4 200 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SPACA7Q96KW9 195 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TRIM7Q9C029 511 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 OR12D3Q9UGF7 316 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 LAMA1P25391 3075 aa12.77□□□□□ -0.37
TRAPPC6B-205ENST00000555269 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 A0A0D9SEW6 157 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 AP5Z1O43299 807 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SNAP91O60641 907 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SIN3BO75182 1162 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 RTN2O75298 545 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 MT-CO1P00395 513 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ACADMP11310 421 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ITPKAP23677 461 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 MPLP40238 635 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 RPS14P62263 151 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SLC12A1Q13621 1099 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 HNRNPA1L2Q32P51 320 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 C11orf74Q86VG3 221 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SLC41A1Q8IVJ1 513 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PIGKQ92643 395 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TOE1Q96GM8 510 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PSMB7Q99436 277 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 OSBPL2Q9H1P3 480 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 TMEM51Q9NW97 253 aa12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 USP36Q9P275 1121 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-205ENST00000555269 MYO1AQ9UBC5 1043 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms