RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 ANKRD7Q92527 254 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 LRRC45Q96CN5 670 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 ASB16Q96NS5 453 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 PLA2G2FQ9BZM2 168 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 BRD8Q9H0E9 1235 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 DPH5Q9H2P9 285 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 TASP1Q9H6P5 420 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 ZFP14Q9HCL3 533 aa18.12■□□□□ 0.49
PSEN1-212ENST00000555254 LSM7Q9UK45 103 aaKnown RBP18.12■□□□□ 0.49
PSEN1-212ENST00000555254 BCLAF3A2AJT9 711 aaKnown RBP18.11■□□□□ 0.49
PSEN1-212ENST00000555254 SOBPA7XYQ1 873 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 F5H5T6 163 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 I6L893 689 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-212ENST00000555254 IFNB1P01574 187 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 CKMP06732 381 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 GBE1Q04446 702 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 CALCOCO2Q13137 446 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 SLC45A4Q5BKX6 768 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 MS4A13Q5J8X5 152 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 RAP1GAP2Q684P5 730 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 ARID3BQ8IVW6 561 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-212ENST00000555254 TFB1MQ8WVM0 346 aaKnown RBP18.11■□□□□ 0.49
PSEN1-212ENST00000555254 CASKIN2Q8WXE0 1202 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 TMEM121Q9BTD3 319 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 SLC46A2Q9BY10 475 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 RNF38Q9H0F5 515 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 ARFGAP3Q9NP61 516 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 ETNK2Q9NVF9 386 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 PPARGC1AQ9UBK2 798 aaKnown RBP18.11■□□□□ 0.49
PSEN1-212ENST00000555254 ZMYM5Q9UJ78 669 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 FBXL21Q9UKT6 434 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 SNX24Q9Y343 169 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 DENND4AQ7Z401 1863 aa18.11■□□□□ 0.49
PSEN1-212ENST00000555254 ECI2O75521 394 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 LATS1O95835 1130 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 IRF1P10914 325 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 RHOQP17081 205 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 ITIH2P19823 946 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 TACR2P21452 398 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 CORO1AP31146 461 aaKnown RBP18.1■□□□□ 0.49
PSEN1-212ENST00000555254 GGCXP38435 758 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 GRM2Q14416 872 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 TRIP13Q15645 432 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-212ENST00000555254 RABGAP1LQ5R372 815 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 PIK3R6Q5UE93 754 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 C14orf80Q86SX3 495 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
PSEN1-212ENST00000555254 CCNYQ8ND76 341 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 ELSPBP1Q96BH3 223 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 FAM129AQ9BZQ8 928 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 ZYG11BQ9C0D3 744 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 SMG9Q9H0W8 520 aaKnown RBP18.1■□□□□ 0.49
PSEN1-212ENST00000555254 RETREG1Q9H6L5 497 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 PCDH9Q9HC56 1237 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 SMPD4Q9NXE4 827 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 DTLQ9NZJ0 730 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 XPO7Q9UIA9 1087 aaKnown RBP18.1■□□□□ 0.49
PSEN1-212ENST00000555254 VANGL2Q9ULK5 521 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 ZNF510Q9Y2H8 683 aa18.1■□□□□ 0.49
PSEN1-212ENST00000555254 ESYT3A0FGR9 886 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 TMEM221A6NGB7 291 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 M0R296 226 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 KCNN4O15554 427 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 MFSD11O43934 449 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 STC2O76061 302 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 H2AFXP16104 143 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 FCARP24071 287 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 HOXC13P31276 330 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 CARSP49589 748 aaKnown RBP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 SLC7A9P82251 487 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 CAV1Q03135 178 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 SIGLEC14Q08ET2 396 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 MANEALQ5VSG8 457 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 DENND1CQ8IV53 801 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 LGI2Q8N0V4 545 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 FAM71DQ8N9W8 422 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 TTC16Q8NEE8 873 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 HNRNPLLQ8WVV9 542 aaKnown RBP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 SEC14L1Q92503 715 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 SNF8Q96H20 258 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 RPRD1AQ96P16 312 aaPredicted RBP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 QKIQ96PU8 341 aaKnown RBP eCLIP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 WHRNQ9P202 907 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 MTRF1LQ9UGC7 380 aaKnown RBP18.09■□□□□ 0.49
PSEN1-212ENST00000555254 DUSP12Q9UNI6 340 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 CPQQ9Y646 472 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 DOCK6Q96HP0 2047 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 GREB1Q4ZG55 1949 aa18.09■□□□□ 0.49
PSEN1-212ENST00000555254 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-212ENST00000555254 DRGXA6NNA5 263 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 HEPACAM2A8MVW5 462 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 WASH4PA8MWX3 477 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 MTSS1O43312 755 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 SRFP11831 508 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 AVPR1AP37288 418 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms