RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ANGPTL3Q9Y5C1 460 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ANKRD31Q8N7Z5 1873 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ATXN2Q99700 1313 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 ERI2A8K979 691 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 PTGESO14684 152 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 LYPLA1O75608 230 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 PRKCGP05129 697 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 CHRM3P20309 590 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 PAPOLAP51003 745 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 MAPRE1Q15691 268 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 KIF19Q2TAC6 998 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 NT5DC4Q86YG4 428 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 PPHLN1Q8NEY8 458 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 CD101Q93033 1021 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 MARK4Q96L34 752 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 FAM237BA0A1B0GVD1 139 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 MOXD2PA6NHM9 499 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 F5H5T6 163 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 AXIN1O15169 862 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 RAMP2O60895 175 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 F9P00740 461 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 ITGAVP06756 1048 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 NR1H3Q13133 447 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 MPP3Q13368 585 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 C6orf89Q6UWU4 347 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 IGDCC3Q8IVU1 814 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 SPNS2Q8IVW8 549 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 ITFG2Q969R8 447 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 GCNAQ96QF7 691 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 XAB2Q9HCS7 855 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 SMG5Q9UPR3 1016 aaKnown RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 A8MUI8 341 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 CACNA2D1P54289 1103 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF460Q14592 562 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 OLFML1Q6UWY5 402 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC24A5Q71RS6 500 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC35F5Q8WV83 523 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 CDH9Q9ULB4 789 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 DNAJC16Q9Y2G8 782 aa12.49□□□□□ -0.41
ARHGEF40-206ENST00000555232 SH3BGRLO75368 114 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 RAB27AP51159 221 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 GALNT3Q14435 633 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 MCRS1Q96EZ8 462 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 PGM2Q96G03 612 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SMOQ99835 787 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 EGFL8Q99944 293 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 CIPCQ9C0C6 399 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 LATS2Q9NRM7 1088 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 MEI4A8MW99 385 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 B2RBV5 119 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 MGRN1O60291 552 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 CCNB1P14635 433 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 PAMP19021 973 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SERPINB3P29508 390 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ECHS1P30084 290 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SPRP35270 261 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 KCNJ2P63252 427 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 TLE2Q04725 743 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 POLD3Q15054 466 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 RNF219Q5W0B1 726 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 DCBLD1Q8N8Z6 715 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 B4GALNT2Q8NHY0 566 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SPATA13Q96N96 652 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 BCO2Q9BYV7 579 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ATP13A1Q9HD20 1204 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 TPP1O14773 563 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 KPNA6O60684 536 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SYN1P17600 705 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 SERPINB4P48594 390 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF177Q13360 481 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 XRCC4Q13426 336 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 CUL3Q13618 768 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 RNASEH2BQ5TBB1 312 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 DDX53Q86TM3 631 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 ARFGAP1Q8N6T3 406 aa12.48□□□□□ -0.41
ARHGEF40-206ENST00000555232 MAB21L3Q8N8X9 362 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms