RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 EARS2Q5JPH6 523 aaKnown RBP5.83□□□□□ -1.48
VRK1-203ENST00000555067 TANGO2Q6ICL3 276 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 KRTAP5-1Q6L8H4 278 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 HERC6Q8IVU3 1022 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 ANKRD52Q8NB46 1076 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 FAM71BQ8TC56 605 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 SPPL3Q8TCT6 385 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 RUBCNQ92622 972 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 P2RY11Q96G91 374 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 SDF4Q9BRK5 362 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 TM2D2Q9BX73 214 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 JMJD4Q9H9V9 463 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 SEMA4BQ9NPR2 832 aaPredicted RBP5.83□□□□□ -1.48
VRK1-203ENST00000555067 TM7SF3Q9NS93 570 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 ZBTB40Q9NUA8 1239 aa5.83□□□□□ -1.48
VRK1-203ENST00000555067 MAGED1Q9Y5V3 778 aaPredicted RBP5.83□□□□□ -1.48
VRK1-203ENST00000555067 A0A087X0M5 115 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 A0A1B0GX30 115 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 PODXLO00592 558 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 NDST3O95803 873 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 MBPP02686 304 aaPredicted RBP5.82□□□□□ -1.48
VRK1-203ENST00000555067 NANOS2P60321 138 aaKnown RBP5.82□□□□□ -1.48
VRK1-203ENST00000555067 TLE2Q04725 743 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 TRPC3Q13507 836 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 KRT32Q14532 448 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 DLGAP5Q15398 846 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 TAF11Q15544 211 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 RAB30Q15771 203 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 MEA1Q16626 185 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 RRAGBQ5VZM2 374 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 GRHL2Q6ISB3 625 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 FBXO38Q6PIJ6 1188 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 FAM57BQ71RH2 274 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 ENOSF1Q7L5Y1 443 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 OTUD7AQ8TE49 926 aaPredicted RBP5.82□□□□□ -1.48
VRK1-203ENST00000555067 TRMT61AQ96FX7 289 aaKnown RBP5.82□□□□□ -1.48
VRK1-203ENST00000555067 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 TMEM45AQ9NWC5 275 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 FEM1BQ9UK73 627 aa5.82□□□□□ -1.48
VRK1-203ENST00000555067 IGLV5-39A0A0G2JS06 123 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 F5H0A9 414 aaPredicted RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 F8W810 466 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 PIP5K1BO14986 540 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 AHCYL1O43865 530 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 USO1O60763 962 aaKnown RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 ZBED4O75132 1171 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 ANXA2P07355 339 aaKnown RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 CLNS1AP54105 237 aaKnown RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 ROR1Q01973 937 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 MTAPQ13126 283 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 ERV3-1Q14264 604 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 ACOX1Q15067 660 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 HAUS3Q68CZ6 603 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 TMCO3Q6UWJ1 677 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 C2CD5Q86YS7 1000 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 GLIS1Q8NBF1 620 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 SUN3Q8TAQ9 357 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 PIGKQ92643 395 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 HVCN1Q96D96 273 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 NLRP4Q96MN2 994 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 TREX2Q9BQ50 279 aaPredicted RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 SCNM1Q9BWG6 230 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 SAP30LQ9HAJ7 183 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 MLXIPQ9HAP2 919 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 PREBQ9HCU5 417 aa5.81□□□□□ -1.48
VRK1-203ENST00000555067 ZCCHC17Q9NP64 241 aaKnown RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 HEYLQ9NQ87 328 aaPredicted RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 SIRT4Q9Y6E7 314 aaPredicted RBP5.81□□□□□ -1.48
VRK1-203ENST00000555067 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 THAP12O43422 761 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 SMAD6O43541 496 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 DOK2O60496 412 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 FAM155BO75949 473 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 ITGA5P08648 1049 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 NAP1L1P55209 391 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 RAE1P78406 368 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 CNGA3Q16281 694 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 ADCK5Q3MIX3 580 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 AASDHQ4L235 1098 aaPredicted RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 ARHGAP15Q53QZ3 475 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 RBM44Q6ZP01 1051 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 RNF44Q7L0R7 432 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 TFAP2DQ7Z6R9 452 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 UEVLDQ8IX04 471 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 TSPYL6Q8N831 410 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 RFFLQ8WZ73 363 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 LRRC46Q96FV0 321 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 ZMAT2Q96NC0 199 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 PPP1R10Q96QC0 940 aaKnown RBP5.8□□□□□ -1.48
VRK1-203ENST00000555067 KATNAL1Q9BW62 490 aa5.8□□□□□ -1.48
VRK1-203ENST00000555067 BICDL2A1A5D9 508 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TNFRSF1BP20333 461 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 DUSP1P28562 367 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 HOXA7P31268 230 aaPredicted RBP5.79□□□□□ -1.48
VRK1-203ENST00000555067 CCR5P51681 352 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 DRG2P55039 364 aaKnown RBP5.79□□□□□ -1.48
VRK1-203ENST00000555067 CASP6P55212 293 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 EFR3AQ14156 821 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 CDC37Q16543 378 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms