RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ATG7O95352 703 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 TAL1P17542 331 aaPredicted RBP14.21□□□□□ -0.14
VTI1B-204ENST00000554659 ALDH7A1P49419 539 aaKnown RBP14.21□□□□□ -0.14
VTI1B-204ENST00000554659 C21orf59P57076 290 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 KCNJ2P63252 427 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF284Q2VY69 593 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 SLC27A1Q6PCB7 646 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 CYP2R1Q6VVX0 501 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 SCUBE3Q8IX30 993 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 RNF145Q96MT1 663 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 VPS28Q9UK41 221 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 AP3M1Q9Y2T2 418 aa14.21□□□□□ -0.14
VTI1B-204ENST00000554659 CENPXA8MT69 81 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 MBL2P11226 248 aaPredicted RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 PBX1P40424 430 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 GTF2BQ00403 316 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CROCCP3Q8IVE0 287 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CARNMT1Q8N4J0 409 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 BHLHE22Q8NFJ8 381 aaPredicted RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 FAM45AQ8TCE6 357 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 KAT5Q92993 513 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 OLFM1Q99784 485 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 TRPM5Q9NZQ8 1165 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 SLC25A13Q9UJS0 675 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 MKL2Q9ULH7 1088 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 PCDHA11Q9Y5I1 949 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 A0A0B4J269 797 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 FAM237BA0A1B0GVD1 139 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 LACTBL1A8MY62 500 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 E5RJQ4 531 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 RAMP2O60895 175 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 LRG1P02750 347 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 INSRRP14616 1297 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 ALOX12P18054 663 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 MRPS22P82650 360 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 DGUOKQ16854 277 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CES3Q6UWW8 571 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 STK32CQ86UX6 486 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 TRPC4APQ8TEL6 797 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 HAS1Q92839 578 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 MCRS1Q96EZ8 462 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 IDI2Q9BXS1 227 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 STN1Q9H668 368 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 PIH1D1Q9NWS0 290 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 KCNK1O00180 336 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CCNT2O60583 730 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 GTF2A2P52657 109 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 PALB2Q86YC2 1186 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 ACTRT2Q8TDY3 377 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 UBASH3BQ8TF42 649 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 SMARCD1Q96GM5 515 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CDHR5Q9HBB8 845 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 A1CFQ9NQ94 594 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 RAD18Q9NS91 495 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 A0A0A0MRY4 1105 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 H3BRB1 525 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 SCNN1BP51168 640 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 DCTN2Q13561 401 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 GSTA3Q16772 222 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CAMK1DQ8IU85 385 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 ACMSDQ8TDX5 336 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 EDEM1Q92611 657 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 SPATA13Q96N96 652 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 IL22Q9GZX6 179 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 TUT1Q9H6E5 874 aaKnown RBP14.2□□□□□ -0.14
VTI1B-204ENST00000554659 ENTPD7Q9NQZ7 604 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 CNTNAP2Q9UHC6 1331 aa14.2□□□□□ -0.14
VTI1B-204ENST00000554659 FAM220BPB1ANY3 271 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SYNCRIPO60506 623 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 DARSP14868 501 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF157P51786 506 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 NEK3P51956 506 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 CDH8P55286 799 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 EPS8Q12929 822 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF57Q68EA5 555 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 KLHL17Q6TDP4 642 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 HERC6Q8IVU3 1022 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 REPS2Q8NFH8 660 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SPATA20Q8TB22 786 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 FBXO44Q9H4M3 255 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 MRPL39Q9NYK5 338 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 LIMD1Q9UGP4 676 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 PSMD10O75832 226 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 MAPK10P53779 464 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ADARP55265 1226 aaKnown RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 IL17AQ16552 155 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 RNF180Q86T96 592 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 FAM228AQ86W67 206 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 LPCAT1Q8NF37 534 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ZSCAN18Q8TBC5 510 aaPredicted RBP14.19□□□□□ -0.14
VTI1B-204ENST00000554659 ENKURQ8TC29 256 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 SHC3Q92529 594 aa14.19□□□□□ -0.14
VTI1B-204ENST00000554659 GLT1D1Q96MS3 346 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms