RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TBC1D3GQ6DHY5 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3CQ6IPX1 549 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 PRPF39Q86UA1 669 aaKnown RBP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TBC1D3Q8IZP1 549 aaPredicted RBP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 LGI2Q8N0V4 545 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 MFSD2AQ8NA29 543 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 PIP4K2CQ8TBX8 421 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 TSC1Q92574 1164 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 PTPRN2Q92932 1015 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 CRELD1Q96HD1 420 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 KDM4CQ9H3R0 1056 aa25.02■■□□□ 1.6
FOXA1-204ENST00000554607 GCN1Q92616 2671 aaKnown RBP25.02■■□□□ 1.6
FOXA1-204ENST00000554607 CAPN9O14815 690 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 WNT9AO14904 365 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 RRP8O43159 456 aaKnown RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 SMC2O95347 1197 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 MZF1P28698 734 aaPredicted RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 EIF2S3P41091 472 aaKnown RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 ACADSBP45954 432 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 RPL34P49207 117 aaKnown RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 PMS1P54277 932 aaKnown RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 SULT2A1Q06520 285 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 HES3Q5TGS1 186 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 NAPEPLDQ6IQ20 393 aa25.01■■□□□ 1.59
FOXA1-204ENST00000554607 RPL10LQ96L21 214 aaKnown RBP25.01■■□□□ 1.59
FOXA1-204ENST00000554607 TK2O00142 265 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 LATO43561 262 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 SEMG2Q02383 582 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 RTP5Q14D33 572 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 FBXL19Q6PCT2 694 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 TAC4Q86UU9 113 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 IQCHQ86VS3 1027 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 CHSY1Q86X52 802 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 APCDD1Q8J025 514 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 ADAM32Q8TC27 787 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 BTN2A3PQ96KV6 586 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 ST7Q9NRC1 585 aa25■■□□□ 1.59
FOXA1-204ENST00000554607 P4HA2O15460 535 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 SLC7A4O43246 635 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 TACR2P21452 398 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 GPD2P43304 727 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 OXCT1P55809 520 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 C19orf57Q0VDD7 668 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 OVGP1Q12889 678 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 BNIP3Q12983 259 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 RAP1GAP2Q684P5 730 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.99■■□□□ 1.59
FOXA1-204ENST00000554607 DSG4Q86SJ6 1040 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 CACTIN-AS1Q8N1I8 211 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 BAP1Q92560 729 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 CEP63Q96MT8 703 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 SPAG5Q96R06 1193 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 PPP1R9BQ96SB3 815 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 SLC12A6Q9UHW9 1150 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 DMTF1Q9Y222 760 aa24.99■■□□□ 1.59
FOXA1-204ENST00000554607 TRIM49BA6NDI0 452 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 F5H5T6 163 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 CKMT2P17540 419 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 ITPKBP27987 946 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 CLDN6P56747 220 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 GCNT1Q02742 428 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 STIM1Q13586 685 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 ZC3H12AQ5D1E8 599 aaKnown RBP24.98■■□□□ 1.59
FOXA1-204ENST00000554607 SFMBT2Q5VUG0 894 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 FAM46CQ5VWP2 391 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 ATP6V0D2Q8N8Y2 350 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 STK32AQ8WU08 396 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 KAT5Q92993 513 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 PRORYQ9H606 182 aa24.98■■□□□ 1.59
FOXA1-204ENST00000554607 XPO7Q9UIA9 1087 aaKnown RBP24.98■■□□□ 1.59
FOXA1-204ENST00000554607 SHROOM3Q8TF72 1996 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 PSMA7O14818 248 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 TLX3O43711 291 aaPredicted RBP24.97■■□□□ 1.59
FOXA1-204ENST00000554607 DRD3P35462 400 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 STK19P49842 368 aaPredicted RBP24.97■■□□□ 1.59
FOXA1-204ENST00000554607 PLK1P53350 603 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 PPP2CBP62714 309 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 PPP2CAP67775 309 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 CCDC40Q4G0X9 1142 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 TTC39BQ5VTQ0 682 aaPredicted RBP24.97■■□□□ 1.59
FOXA1-204ENST00000554607 SYPL2Q5VXT5 272 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 RRAGAQ7L523 313 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 FMR1NBQ8N0W7 255 aaPredicted RBP24.97■■□□□ 1.59
FOXA1-204ENST00000554607 LMO3Q8TAP4 145 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 SMARCE1Q969G3 411 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 FAM131CQ96AQ9 280 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 MED15Q96RN5 788 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 POPDC2Q9HBU9 364 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.97■■□□□ 1.59
FOXA1-204ENST00000554607 ARHGAP20Q9P2F6 1191 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 CYTH4Q9UIA0 394 aa24.97■■□□□ 1.59
FOXA1-204ENST00000554607 TRUB2O95900 331 aaKnown RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 CALCAP01258 141 aa24.96■■□□□ 1.59
FOXA1-204ENST00000554607 VASPP50552 380 aaPredicted RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 STAT4Q14765 748 aa24.96■■□□□ 1.59
FOXA1-204ENST00000554607 KANSL1Q7Z3B3 1105 aa24.96■■□□□ 1.59
FOXA1-204ENST00000554607 SPATS2Q86XZ4 545 aaKnown RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 LSM14AQ8ND56 463 aaKnown RBP24.96■■□□□ 1.59
FOXA1-204ENST00000554607 SPATA20Q8TB22 786 aa24.96■■□□□ 1.59
FOXA1-204ENST00000554607 OR8D1Q8WZ84 308 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms