RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CSF2RBP32927 897 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 VIPR2P41587 438 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 PPP2CBP62714 309 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 PPP2CAP67775 309 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 STILQ15468 1287 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CCDC6Q16204 474 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 UGT8Q16880 541 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 TOR2AQ5JU69 321 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 SLC27A1Q6PCB7 646 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 VITQ6UXI7 678 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 PDZD4Q76G19 769 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 KCNK18Q7Z418 384 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 KBTBD6Q86V97 674 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 LYSMD2Q8IV50 215 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 C4orf19Q8IY42 314 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 YAF2Q8IY57 180 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CPA6Q8N4T0 437 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 LEMD2Q8NC56 503 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 GAB3Q8WWW8 586 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 ZC3H10Q96K80 434 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 ZNF512Q96ME7 567 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 BTBD2Q9BX70 525 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 NFKBIZQ9BYH8 718 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 QRSL1Q9H0R6 528 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 NXF3Q9H4D5 531 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 TRPV4Q9HBA0 871 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 RBM12Q9NTZ6 932 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 ZNF180Q9UJW8 692 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CDY1Q9Y6F8 540 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 MYH6P13533 1939 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 KLF18A0A0U1RQI7 1052 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MYBPHLA2RUH7 354 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 C4orf47A7E2U8 309 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 HEPACAM2A8MVW5 462 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TMEM189-UBE2V1I3L0A0 370 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TAF4O00268 1085 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CHADO15335 359 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 ATG13O75143 517 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 B3GAT3O94766 335 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 RHOBTB1O94844 696 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CCDC192P0DO97 292 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CSRP1P21291 193 aaKnown RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 ARL2P36404 184 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MPLP40238 635 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 RECQLP46063 649 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MTNR1BP49286 362 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 IL13RA1P78552 427 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 EMC2Q15006 297 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 SURF1Q15526 300 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 SLC8B1Q6J4K2 584 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MOXD1Q6UVY6 613 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 LIMS2Q7Z4I7 341 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 RALGPS2Q86X27 583 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 SLC41A1Q8IVJ1 513 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TCEAL8Q8IYN2 117 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 ELMOD1Q8N336 334 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CAMKK1Q8N5S9 505 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 HASPINQ8TF76 798 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 JADE3Q92613 823 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TCEAL4Q96EI5 215 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 FAM20AQ96MK3 541 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 SCNM1Q9BWG6 230 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MEGF9Q9H1U4 602 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 OR10A5Q9H207 317 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 BARX1Q9HBU1 254 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 TCF7L1Q9HCS4 588 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 SH3GLB2Q9NR46 395 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 CACNG4Q9UBN1 327 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 NAP1L2Q9ULW6 460 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 ZDHHC9Q9Y397 364 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 FAM208BQ5VWN6 2430 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 USP24Q9UPU5 2620 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
ATXN3-228ENST00000554592 LOXHD1Q8IVV2 1947 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 H7C4K7 107 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 PTGESO14684 152 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 GPR42O15529 346 aa5.29□□□□□ -1.56
ATXN3-228ENST00000554592 B4GALT5O43286 388 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms