RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 KRT37O76014 449 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 ALDH2P05091 517 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 WEE2P0C1S8 567 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 PNMA6AP0CW24 399 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 LAG3P18627 525 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 TRIM21P19474 475 aaKnown RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 ACO1P21399 889 aaKnown RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 PAX3P23760 479 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 TBXAS1P24557 533 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 AFF3P51826 1226 aaKnown RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 MFAP3P55082 362 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CDH8P55286 799 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 GCNT1Q02742 428 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CUL2Q13617 745 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 RAPGEF1Q13905 1077 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 TRIM14Q14142 442 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 DRAP1Q14919 205 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 SOWAHAQ2M3V2 549 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CATSPEREQ5SY80 951 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 SPOUT1Q5T280 376 aaKnown RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 WSCD1Q658N2 575 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 PDXDC1Q6P996 788 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 LIPIQ6XZB0 460 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 ENOSF1Q7L5Y1 443 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 B3GNT8Q7Z7M8 397 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 DRC7Q8IY82 874 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 SLC39A11Q8N1S5 342 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 PDCL2Q8N4E4 241 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CCDC150Q8NCX0 1101 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 KBTBD7Q8WVZ9 684 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 SHC3Q92529 594 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF558Q96NG5 402 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 MMS19Q96T76 1030 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 MRPL45Q9BRJ2 306 aaKnown RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 COLEC11Q9BWP8 271 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 VN1R3Q9BXE9 311 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 STK33Q9BYT3 514 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 EDEM3Q9BZQ6 932 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 IMPG2Q9BZV3 1241 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CYP3A43Q9HB55 503 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 RIC8BQ9NVN3 520 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 ADAM28Q9UKQ2 775 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 L1RE1Q9UN81 338 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CNTN6Q9UQ52 1028 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 DAAM1Q9Y4D1 1078 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 NME7Q9Y5B8 376 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 SNX9Q9Y5X1 595 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 PLXNA4Q9HCM2 1894 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 LINC01553A4QN01 128 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 LRRC53A6NM62 1247 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 AKR1B15C9JRZ8 316 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 F8VZ95 297 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 GABRDO14764 452 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 HUS1O60921 280 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 MFAP3LO75121 409 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TACC1O75410 805 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TADA2AO75478 443 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FKBP9O95302 570 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 CALCAP01258 141 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 P4HA1P13674 534 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TYMPP19971 482 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 SDHAP31040 664 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 CASP14P31944 242 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 GJA4P35212 333 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 KRT9P35527 623 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 ALDH7A1P49419 539 aaKnown RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 SCNN1BP51168 640 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 ADKP55263 362 aaKnown RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TNNC1P63316 161 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 ZBED6P86452 979 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 NFKB2Q00653 900 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 RTP5Q14D33 572 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 CD276Q5ZPR3 534 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FUT10Q6P4F1 479 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 CD300LDQ6UXZ3 194 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 DSTYKQ6XUX3 929 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FKBP9P1Q75LS8 142 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TAS1R1Q7RTX1 841 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 CACNA2D4Q7Z3S7 1137 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 DDX42Q86XP3 938 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FAM129CQ86XR2 697 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FAM71AQ8IYT1 594 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 RNF168Q8IYW5 571 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 ADGRF2Q8IZF7 708 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 TC2NQ8N9U0 490 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 OR2W6PQ8NHA6 318 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 JAKMIP2Q96AA8 810 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 DACT3Q96B18 629 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 IQCDQ96DY2 449 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 IGSF21Q96ID5 467 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 FAM81BQ96LP2 452 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 PPP1R9BQ96SB3 815 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 ELF4Q99607 663 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-212ENST00000554486 GORASP1Q9BQQ3 440 aa6.67□□□□□ -1.34
SCFD1-212ENST00000554486 RTP3Q9BQQ7 232 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms