RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 INSRRP14616 1297 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 AOC1P19801 751 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SDHBP21912 280 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 HOXA13P31271 388 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CCR1P32246 355 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 KRT2P35908 639 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CHRNA4P43681 627 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NRIP1P48552 1158 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 KPNA1P52294 538 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ACTR2P61160 394 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 HAND2P61296 217 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CUL4AQ13619 759 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 BLMHQ13867 455 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 RFTN1Q14699 578 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TARBP2Q15633 366 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CFAP221Q4G0U5 840 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FBXO48Q5FWF7 155 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 BMP2KLQ5H9B9 411 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PRSS36Q5K4E3 855 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TTC22Q5TAA0 569 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FDX2Q6P4F2 183 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SASS6Q6UVJ0 657 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 LRIG3Q6UXM1 1119 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TMTC3Q6ZXV5 915 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 BNIPLQ7Z465 357 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ECHDC2Q86YB7 292 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF527Q8NB42 609 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NEK11Q8NG66 645 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PIP4K2CQ8TBX8 421 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GRIN3AQ8TCU5 1115 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM216AQ8WUB2 273 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 DNAJB3Q8WWF6 145 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TCP11Q8WWU5 503 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 MBOAT7Q96N66 472 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NT5C3AQ9H0P0 336 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CPVLQ9H3G5 476 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 BCAS3Q9H6U6 928 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TLE6Q9H808 572 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 RXFP1Q9HBX9 757 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GJB4Q9NTQ9 266 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 IGSF9Q9P2J2 1179 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 WNT16Q9UBV4 365 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHB10Q9UN67 800 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TNFSF13BQ9Y275 285 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ZKSCAN5Q9Y2L8 839 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NUP210Q8TEM1 1887 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CNTNAP2Q9UHC6 1331 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 DOCK8Q8NF50 2099 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 IGLV3-22A0A075B6J6 115 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 A0A0U1RQF3 1178 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8JA6NMD2 632 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8TH3BQL2 631 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 AP5Z1O43299 807 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PGM3O95394 542 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PRAMEF12O95522 483 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PF4P02776 101 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CSTBP04080 98 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CYP21A2P08686 494 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 JAK1P23458 1154 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CTSSP25774 331 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PPARGP37231 505 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 HTR2BP41595 481 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PCP4P48539 62 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GIPRP48546 466 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 RNF144AP50876 292 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 STAT5BP51692 787 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CASP6P55212 293 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ERVFC1P60507 584 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ACTR1AP61163 376 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NOP14P78316 857 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 RPP38P78345 283 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 OLR1P78380 273 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CDK17Q00537 523 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 OTUD4Q01804 1114 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 ITGB3BPQ13352 177 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SEMA5AQ13591 1074 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CUL1Q13616 776 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 COTL1Q14019 142 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NOLC1Q14978 699 aaKnown RBP eCLIP2.8□□□□□ -1.965e-32■■■■■ 47.5
PRPF39-206ENST00000554429 TMTC4Q5T4D3 741 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 AAGABQ6PD74 315 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SLC2A7Q6PXP3 512 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 MOXD1Q6UVY6 613 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 GK5Q6ZS86 529 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 DHX32Q7L7V1 743 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CHST3Q7LGC8 479 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM228AQ86W67 206 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SULF2Q8IWU5 870 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 CCDC13Q8IYE1 715 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 C10orf67Q8IYJ2 551 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SRBD1Q8N5C6 995 aaKnown RBP2.8□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM105Q8N8V8 129 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 AGBL5Q8NDL9 886 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM13CQ8NE31 585 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 OR52K1Q8NGK4 314 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 SMARCC2Q8TAQ2 1214 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 FAM81AQ8TBF8 368 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 PPP1R13LQ8WUF5 828 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 INPP5DQ92835 1189 aa2.8□□□□□ -1.96
PRPF39-206ENST00000554429 NKD1Q969G9 470 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms