RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CXorf57Q6NSI4 855 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 FBXL22Q6P050 247 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 KIAA1324Q6UXG2 1013 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 MON1BQ7L1V2 547 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 IRF2BP2Q7Z5L9 587 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 RABEPKQ7Z6M1 372 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SYT12Q8IV01 421 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 TMEFF1Q8IYR6 380 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF683Q8IZ20 524 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 OR2T3Q8NH03 318 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 BAP1Q92560 729 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 IGSF8Q969P0 613 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SIPA1Q96FS4 1042 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF419Q96HQ0 510 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 C1orf74Q96LT6 269 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CFAP57Q96MR6 1250 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 RPRD1AQ96P16 312 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PPP1R9BQ96SB3 815 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 AGPAT1Q99943 283 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 C11orf70Q9BRQ4 267 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SYT11Q9BT88 431 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 TKTL2Q9H0I9 626 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CBX8Q9HC52 389 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CD93Q9NPY3 652 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PRSS16Q9NQE7 514 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ANLNQ9NQW6 1124 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 METTL5Q9NRN9 209 aaKnown RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 WSB2Q9NYS7 404 aaPredicted RBP7.76□□□□□ -1.17
LINC00640-201ENST00000554409 SUN2Q9UH99 717 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PILRBQ9UKJ0 227 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 ERVW-1Q9UQF0 538 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 TBC1D30Q9Y2I9 924 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 PCDH15Q96QU1 1955 aa7.76□□□□□ -1.17
LINC00640-201ENST00000554409 CHD5Q8TDI0 1954 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 C2CD4BA6NLJ0 364 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 DRGXA6NNA5 263 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 GDF9O60383 454 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 NDUFS2O75306 463 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ACADMP11310 421 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 PDGFRAP16234 1089 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CD6P30203 668 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 OXTRP30559 389 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 IRAK1P51617 712 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ATXN1P54253 815 aaKnown RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CDH4P55283 916 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 TPM4P67936 248 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 FOXK2Q01167 660 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 KCNC4Q03721 635 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SULT2A1Q06520 285 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF33AQ06730 810 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ZNF177Q13360 481 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 NR1I3Q14994 352 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SKOR2Q2VWA4 1001 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 HNRNPA1L2Q32P51 320 aaKnown RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CCDC14Q49A88 953 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 FIGNQ5HY92 759 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ARTNQ5T4W7 220 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 PPP1R2P3Q6NXS1 205 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SLC23A3Q6PIS1 610 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 STRADAQ7RTN6 431 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CIR1Q86X95 450 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SLC41A1Q8IVJ1 513 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 APCDD1Q8J025 514 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 EMC1Q8N766 993 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 C3orf20Q8ND61 904 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CADM4Q8NFZ8 388 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 JOSD2Q8TAC2 188 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SLC30A5Q8TAD4 765 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 RXFP2Q8WXD0 754 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CENPIQ92674 756 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 FOXJ1Q92949 421 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ERLEC1Q96DZ1 483 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ALG14Q96F25 216 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 HAPLN3Q96S86 360 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 EDEM3Q9BZQ6 932 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 TTYH3Q9C0H2 523 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 PCED1AQ9H1Q7 454 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 RSPH9Q9H1X1 276 aaPredicted RBP7.75□□□□□ -1.17
LINC00640-201ENST00000554409 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 AIPL1Q9NZN9 384 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 ADAM22Q9P0K1 906 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 VANGL2Q9ULK5 521 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 OR51B4Q9Y5P0 310 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 CFAP54Q96N23 3096 aa7.75□□□□□ -1.17
LINC00640-201ENST00000554409 EDDM13A0A1B0GTR0 161 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 LNP1A1A4G5 178 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 FAM170AA1A519 330 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 TARSL2A2RTX5 802 aaKnown RBP7.74□□□□□ -1.17
LINC00640-201ENST00000554409 LRRC53A6NM62 1247 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 SIGLEC16A6NMB1 481 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 E9PAM4 449 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 KHNYNO15037 678 aaKnown RBP7.74□□□□□ -1.17
LINC00640-201ENST00000554409 SERPINC1P01008 464 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 KRT3P12035 628 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 ITPKAP23677 461 aa7.74□□□□□ -1.17
LINC00640-201ENST00000554409 MZF1P28698 734 aaPredicted RBP7.74□□□□□ -1.17
LINC00640-201ENST00000554409 SDC4P31431 198 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms