RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SULT2A1Q06520 285 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 NME3Q13232 169 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 NCAPHQ15003 741 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SYCP1Q15431 976 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 HNRNPA1L2Q32P51 320 aaKnown RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PLEKHG6Q3KR16 790 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC25A52Q3SY17 297 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 C5orf22Q49AR2 442 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 FSCBQ5H9T9 825 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PPM1JQ5JR12 505 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 WDR45BQ5MNZ6 344 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 FAM102AQ5T9C2 384 aaPredicted RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 TAF3Q5VWG9 929 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 DAB2IPQ5VWQ8 1189 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PACS2Q86VP3 889 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC41A1Q8IVJ1 513 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 CCAR2Q8N163 923 aaKnown RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 NEK11Q8NG66 645 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 DNASE2BQ8WZ79 361 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 TOE1Q96GM8 510 aaKnown RBP10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 MRGPRX3Q96LB0 322 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 HSPA12BQ96MM6 686 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SPAG5Q96R06 1193 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 BPIFA3Q9BQP9 254 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 NUP58Q9BVL2 599 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 HSD3B7Q9H2F3 369 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 CD93Q9NPY3 652 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 PIGVQ9NUD9 493 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SCML1Q9UN30 329 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC6A14Q9UN76 642 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 MAST4O15021 2626 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 CHD5Q8TDI0 1954 aa10.74□□□□□ -0.69
PTCD2P1-201ENST00000554393 SYNJ2BP-COX16A0A087WUM0 186 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 TARSL2A2RTX5 802 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 CDX4O14627 284 aaPredicted RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 EPHB6O15197 1021 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 PAGE1O75459 146 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 CLDN11O75508 207 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 GFPT2O94808 682 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ENGP17813 658 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 MMP8P22894 467 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 SULT1E1P49888 294 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 RPS14P62263 151 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ECT2LQ008S8 904 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 FMO1Q01740 532 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 SFSWAPQ12872 951 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 AUHQ13825 339 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 TTC31Q49AM3 519 aaPredicted RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 NAA35Q5VZE5 725 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZNF776Q68DI1 518 aaPredicted RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 FBXL22Q6P050 247 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 BNIPLQ7Z465 357 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ERLEC1Q96DZ1 483 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 RPRD1AQ96P16 312 aaPredicted RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 RSPH9Q9H1X1 276 aaPredicted RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 WDCPQ9H6R7 721 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 CAPN10Q9HC96 672 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 COX16Q9P0S2 106 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ERVW-1Q9UQF0 538 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 HS3ST4Q9Y661 456 aa10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 ATXN2Q99700 1313 aaKnown RBP10.73□□□□□ -0.69
PTCD2P1-201ENST00000554393 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 TP53BP1Q12888 1972 aaPredicted RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 PCNX2A6NKB5 2137 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 EDDM13A0A1B0GTR0 161 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 C4orf47A7E2U8 309 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 METTL12A8MUP2 240 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 RNASEH1O60930 286 aaKnown RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 DNTTP04053 509 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CFIP05156 583 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 ADRB1P08588 477 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 GNSP15586 552 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CHRNB2P17787 502 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 FLT3P36888 993 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 NNMTP40261 264 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CDH4P55283 916 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 GSCP56915 257 aaPredicted RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 RNASE9P60153 205 aaKnown RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CENPCQ03188 943 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 UBXN1Q04323 297 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 GFPT1Q06210 699 aaPredicted RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 RNF219Q5W0B1 726 aaPredicted RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 CXorf57Q6NSI4 855 aaKnown RBP10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 USP30Q70CQ3 517 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 APCDD1Q8J025 514 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 DEFB119Q8N690 84 aa10.72□□□□□ -0.69
PTCD2P1-201ENST00000554393 AOPEPQ8N6M6 819 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms