RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SNX19Q92543 992 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 PIWIL1Q96J94 861 aaKnown RBP14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 PDCL3Q9H2J4 239 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 TM7SF3Q9NS93 570 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 MARCH2Q9P0N8 246 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 HESX1Q9UBX0 185 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 STRIP2Q9ULQ0 834 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 CLEC4EQ9ULY5 219 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 TFR2Q9UP52 801 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 PCDHA13Q9Y5I0 950 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 DMXL2Q8TDJ6 3036 aa14.53□□□□□ -0.08
SPTLC2-202ENST00000554365 XPO1O14980 1071 aaKnown RBP14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 CBFA2T3O75081 653 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 FTLP02792 175 aaPredicted RBP14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 MMP8P22894 467 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 BNC1Q01954 994 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 PDCLQ13371 301 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 EIF4HQ15056 248 aaKnown RBP14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 HLA-BQ31612 363 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 IL27RAQ6UWB1 636 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 ARHGAP18Q8N392 663 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 CPXM1Q96SM3 734 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 SLC4A5Q9BY07 1137 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 FNDC3AQ9Y2H6 1198 aaKnown RBP14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 GPSM3Q9Y4H4 160 aa14.52□□□□□ -0.09
SPTLC2-202ENST00000554365 A0A1B0GVT2 93 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 GOLGA8CPA6NN73 597 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 TSPAN3O60637 253 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 ERBB2P04626 1255 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 HLA-EP13747 358 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 MAGEA1P43355 309 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 GABRB2P47870 512 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 RGS7P49802 495 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 GALCP54803 685 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 COL28A1Q2UY09 1125 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 C2CD6Q53TS8 623 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 TMEM215Q68D42 235 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 MMS22LQ6ZRQ5 1243 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 GLRX5Q86SX6 157 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 PIGZQ86VD9 579 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 MCOLN2Q8IZK6 566 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 CPXM2Q8N436 756 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 MDM1Q8TC05 714 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 KIAA1524Q8TCG1 905 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 RHBDD1Q8TEB9 315 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 STK32AQ8WU08 396 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 TRIM44Q96DX7 344 aaPredicted RBP14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 SLC2A11Q9BYW1 496 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 UBXN6Q9BZV1 441 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 LACRTQ9GZZ8 138 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 PPP2R2CQ9Y2T4 447 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 CEP83Q9Y592 693 aa14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 DSPP15924 2871 aaKnown RBP14.51□□□□□ -0.09
SPTLC2-202ENST00000554365 TCRBV5S1A1TA0A578 114 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 PJA2O43164 708 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 TIMM44O43615 452 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 IGLV3-19P01714 112 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 ZNF883P0CG24 379 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 ARHGAP25P42331 645 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 NSFP46459 744 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 CSNK1EP49674 416 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 TKTL1P51854 596 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 VAV2P52735 878 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 SPA17Q15506 151 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 FNDC3BQ53EP0 1204 aaKnown RBP14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 RAB41Q5JT25 222 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 TMEM110Q86TL2 294 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 PDZD3Q86UT5 571 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 REXO1L1PQ8IX06 675 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 ZNF366Q8N895 744 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 OR2T3Q8NH03 318 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 KCTD13Q8WZ19 329 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 PLD4Q96BZ4 506 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 ARHGEF26Q96DR7 871 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 PPP1R13BQ96KQ4 1090 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 HSFY1Q96LI6 401 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 C11orf70Q9BRQ4 267 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 THAP2Q9H0W7 228 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 KCND1Q9NSA2 647 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 INTUQ9ULD6 942 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 SLCO1B1Q9Y6L6 691 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 FREM2Q5SZK8 3169 aa14.5□□□□□ -0.09
SPTLC2-202ENST00000554365 LAMA5O15230 3695 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 ANKRD62A6NC57 917 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 USP27XA6NNY8 438 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 E5RJQ4 531 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 FLRT2O43155 660 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 ZBED1O96006 694 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 H2AFZP0C0S5 128 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 CCDC175P0C221 793 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 ATXN1LP0C7T5 689 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 TMEM253P0C7T8 217 aa14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 HARS2P49590 506 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 AFF3P51826 1226 aaKnown RBP14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 GSCP56915 257 aaPredicted RBP14.49□□□□□ -0.09
SPTLC2-202ENST00000554365 SLC8A3P57103 927 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms