RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CCDC6Q16204 474 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ASIC2Q16515 512 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 RSPO4Q2I0M5 234 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 HNRNPA1L2Q32P51 320 aaKnown RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 AASDHQ4L235 1098 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 SFMBT2Q5VUG0 894 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 DNAJC24Q6P3W2 148 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 LRRC31Q6UY01 552 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ARMCX6Q7L4S7 300 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 STRADAQ7RTN6 431 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 FAM131BQ86XD5 332 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 TMEFF1Q8IYR6 380 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF366Q8N895 744 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 IQCDQ96DY2 449 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 MYO19Q96H55 970 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 HAPLN3Q96S86 360 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 SIK2Q9H0K1 926 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 CD93Q9NPY3 652 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ANLNQ9NQW6 1124 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 CNOT1A5YKK6 2376 aaKnown RBP13.45□□□□□ -0.26
SHMT2-211ENST00000554310 SPTBN2O15020 2390 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 PI4KAP42356 2102 aa13.45□□□□□ -0.26
SHMT2-211ENST00000554310 CACNA1EQ15878 2313 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ANKRD62A6NC57 917 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ACADMP11310 421 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 PRKCIP41743 596 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 TPMTP51580 245 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 IRAK1P51617 712 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 LIMK1P53667 647 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ATXN1P54253 815 aaKnown RBP13.44□□□□□ -0.26
SHMT2-211ENST00000554310 TERF1P54274 439 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ATP11AP98196 1134 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 TTC31Q49AM3 519 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-211ENST00000554310 PEAR1Q5VY43 1037 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-211ENST00000554310 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 C14orf80Q86SX3 495 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 CACUL1Q86Y37 369 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 VSTM4Q8IW00 320 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF683Q8IZ20 524 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 APCDD1Q8J025 514 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 FOXJ1Q92949 421 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 PRSS16Q9NQE7 514 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 AIPL1Q9NZN9 384 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-211ENST00000554310 TBC1D30Q9Y2I9 924 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 NCOR2Q9Y618 2525 aa13.44□□□□□ -0.26
SHMT2-211ENST00000554310 DCHS1Q96JQ0 3298 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 EDDM13A0A1B0GTR0 161 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 A0A1W2PQJ5 194 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TCRBV5S1A1TA0A578 114 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 SIGLEC16A6NMB1 481 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 DRGXA6NNA5 263 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 E9PAM4 449 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 KHNYNO15037 678 aaKnown RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 RNASEH1O60930 286 aaKnown RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 NDUFS2O75306 463 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 GPD1P21695 349 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 MZF1P28698 734 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 RFC1P35251 1148 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 NNMTP40261 264 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 PBX1P40424 430 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 CTSOP43234 321 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 CCZ1BP86790 482 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 NRG1Q02297 640 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF33AQ06730 810 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 CDO1Q16878 200 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 C15orf59Q2T9L4 293 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 C6orf118Q5T5N4 469 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF776Q68DI1 518 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TCEAL6Q6IPX3 200 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 ACAD10Q6JQN1 1059 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 PHLDB2Q86SQ0 1253 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 SETD3Q86TU7 594 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 MCOLN2Q8IZK6 566 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 PIGKQ92643 395 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 CENPIQ92674 756 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TCEAL3Q969E4 200 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TOE1Q96GM8 510 aaKnown RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 VCPIP1Q96JH7 1222 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 RTKNQ9BST9 563 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 RSPH9Q9H1X1 276 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-211ENST00000554310 SMOC1Q9H4F8 434 aa13.43□□□□□ -0.26
SHMT2-211ENST00000554310 TMPRSS4Q9NRS4 437 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms