RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 BYSLQ13895 437 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 POLD3Q15054 466 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 SIX1Q15475 284 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ANO4Q32M45 955 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ALFQ53S48 1182 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 FYB2Q5VWT5 728 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 AFMIDQ63HM1 303 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 C1orf228Q6PIY5 440 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 PARM1Q6UWI2 310 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 TPGS1Q6ZTW0 290 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ANKS1BQ7Z6G8 1248 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ADAT2Q7Z6V5 191 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 CFAP52Q8N1V2 620 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 CCDC26Q8TAB7 109 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 CCHCR1Q8TD31 782 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 NSMCE1Q8WV22 266 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 TFB1MQ8WVM0 346 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 MAGOHBQ96A72 148 aaKnown RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 RSPRY1Q96DX4 576 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 QKIQ96PU8 341 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 KXD1Q9BQD3 176 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 AP1M1Q9BXS5 423 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 RRAGDQ9NQL2 400 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ZNF212Q9UDV6 495 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 SZT2Q5T011 3432 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 COL4A2P08572 1712 aa14.88□□□□□ -0.03
SHMT2-210ENST00000553950 ZSCAN5CA6NGD5 496 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 H7C0C1 242 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 PDE2AO00408 941 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SCAMP3O14828 347 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CNTN5O94779 1100 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SLU7O95391 586 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 ITGAVP06756 1048 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 RBP3P10745 1247 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 TYRP14679 529 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 PECAM1P16284 738 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 EIF2DP41214 584 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 GARSP41250 739 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 ATP5OP48047 213 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 GNA12Q03113 381 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 GBE1Q04446 702 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 DMC1Q14565 340 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 E2F5Q15329 346 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 LLGL1Q15334 1064 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 DHCR24Q15392 516 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SLC45A4Q5BKX6 768 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 LY6G5CQ5SRR4 150 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 TMCO4Q5TGY1 634 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 HEATR6Q6AI08 1181 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 POTEHQ6S545 545 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SYDE1Q6ZW31 735 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 MAATS1Q7Z4T9 603 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 METTL3Q86U44 580 aaKnown RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CIR1Q86X95 450 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 ADGRG2Q8IZP9 1017 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CARNMT1Q8N4J0 409 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 NPWQ8N729 165 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 PRELID2Q8N945 189 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 DCAF4L2Q8NA75 395 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 FIBINQ8TAL6 211 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SLC35B2Q8TB61 432 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CSGALNACT1Q8TDX6 532 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 WFIKKN2Q8TEU8 576 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 DNASE1L2Q92874 299 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 FGF14Q92915 247 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 FATE1Q969F0 183 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CCDC114Q96M63 670 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 FAM83CQ9BQN1 747 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 HERPUD2Q9BSE4 406 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 C2orf49Q9BVC5 232 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 CARD6Q9BX69 1037 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 MAGEB5Q9BZ81 275 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 BRD9Q9H8M2 597 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 TRPV5Q9NQA5 729 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 ETNK2Q9NVF9 386 aa14.87□□□□□ -0.03
SHMT2-210ENST00000553950 KIAA1522Q9P206 1035 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-210ENST00000553950 TCRBV7S2A1N4TA0A589 114 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 BCLAF3A2AJT9 711 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 RASA4BC9J798 803 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 DFFAO00273 331 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 TRDMT1O14717 391 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 NDC80O14777 642 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 RASA4O43374 803 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 GDI1P31150 447 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ACTN2P35609 894 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 SGSHP51688 502 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 PFKPQ01813 784 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ADCY2Q08462 1091 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 PPIDQ08752 370 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 RUNX3Q13761 415 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ITPRIPL2Q3MIP1 535 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 GLE1Q53GS7 698 aaKnown RBP14.86□□□□□ -0.03
SHMT2-210ENST00000553950 ARTNQ5T4W7 220 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 C8orf74Q6P047 294 aa14.86□□□□□ -0.03
SHMT2-210ENST00000553950 DARS2Q6PI48 645 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms