RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BTBD16Q32M84 506 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 ASPHD1Q5U4P2 390 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 DAB2IPQ5VWQ8 1189 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 RASGRP2Q7LDG7 609 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 ANKS1BQ7Z6G8 1248 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 ZDHHC17Q8IUH5 632 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SAMD14Q8IZD0 417 aaPredicted RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 ATG16L2Q8NAA4 619 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 BICD2Q8TD16 824 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 POF1BQ8WVV4 589 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 LYZL4Q96KX0 146 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SORBS1Q9BX66 1292 aaKnown RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 ABHD16BQ9H3Z7 469 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 ELAC1Q9H777 363 aaKnown RBP3.67□□□□□ -1.82
VRK1-202ENST00000553683 PDE11AQ9HCR9 933 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 TAGLN3Q9UI15 199 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 PKP3Q9Y446 797 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SQORQ9Y6N5 450 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SLC4A4Q9Y6R1 1079 aa3.67□□□□□ -1.82
VRK1-202ENST00000553683 SEPT4O43236 478 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 MSI1O43347 362 aaKnown RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 FAM155BO75949 473 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 NEURL1O76050 574 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 SLC16A2P36021 539 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 LINC00205P59089 165 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 RHAGQ02094 409 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 CHAF1AQ13111 956 aaPredicted RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 GALNT3Q14435 633 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 RPS6KA2Q15349 733 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 SMAD1Q15797 465 aaKnown RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 CCDC38Q502W7 563 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 LIN54Q6MZP7 749 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 AADACL2Q6P093 401 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 SCAMP5Q8TAC9 235 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 LPAR1Q92633 364 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 SLC25A28Q96A46 364 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 MARK4Q96L34 752 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 ADAD1Q96M93 576 aaKnown RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 FRG2BQ96QU4 278 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 MPHOSPH6Q99547 160 aaKnown RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 TWSG1Q9GZX9 223 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 BRD8Q9H0E9 1235 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 OSBPL5Q9H0X9 879 aaPredicted RBP3.66□□□□□ -1.82
VRK1-202ENST00000553683 SAYSD1Q9NPB0 183 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 G6PC2Q9NQR9 355 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.66□□□□□ -1.82
VRK1-202ENST00000553683 LRFN1Q9P244 771 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 COG5Q9UP83 839 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 LZTS1Q9Y250 596 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 DAAM1Q9Y4D1 1078 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 PCDHA10Q9Y5I2 948 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 COMMD10Q9Y6G5 202 aa3.66□□□□□ -1.82
VRK1-202ENST00000553683 TMEM272A0A1B0GTI8 110 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 hCG_1642624A0A1W2PR95 340 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 TRIM38O00635 465 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 CCNT1O60563 726 aaKnown RBP3.65□□□□□ -1.83
VRK1-202ENST00000553683 HEXIM1O94992 359 aaKnown RBP3.65□□□□□ -1.83
VRK1-202ENST00000553683 TNNT1P13805 278 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 GYS1P13807 737 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 RHBDL3P58872 404 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 RNASELQ05823 741 aaKnown RBP3.65□□□□□ -1.83
VRK1-202ENST00000553683 PMPCAQ10713 525 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 FHL1Q13642 323 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 ALKBH1Q13686 389 aaKnown RBP3.65□□□□□ -1.83
VRK1-202ENST00000553683 PTGR1Q14914 329 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 PRTGQ2VWP7 1150 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 GALNTL6Q49A17 601 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 ALG10Q5BKT4 473 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 ALG10BQ5I7T1 473 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 Q5PR19 223 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 GGT6Q6P531 493 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 AAGABQ6PD74 315 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 TMEM200AQ86VY9 491 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 SLC25A41Q8N5S1 370 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 CLEC4CQ8WTT0 213 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 TMEM174Q8WUU8 243 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 TRAPPC12Q8WVT3 735 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 THAP4Q8WY91 577 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 TRAPPC9Q96Q05 1148 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 MAGEH1Q9H213 219 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 PNRC2Q9NPJ4 139 aaKnown RBP3.65□□□□□ -1.83
VRK1-202ENST00000553683 ANAPC4Q9UJX5 808 aa3.65□□□□□ -1.83
VRK1-202ENST00000553683 FAM90A20PA6NIJ5 464 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 KIF1CO43896 1103 aaKnown RBP3.64□□□□□ -1.83
VRK1-202ENST00000553683 MYZAPP0CAP1 466 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 PKMP14618 531 aaKnown RBP3.64□□□□□ -1.83
VRK1-202ENST00000553683 CHN1P15882 459 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 PRPH2P23942 346 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 RPS6KA3P51812 740 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 CDK18Q07002 472 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 EFR3AQ14156 821 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 PARM1Q6UWI2 310 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 GALNT7Q86SF2 657 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 ZDHHC23Q8IYP9 409 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 GALNT15Q8N3T1 639 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 FSIP1Q8NA03 581 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 HDAC7Q8WUI4 952 aa3.64□□□□□ -1.83
VRK1-202ENST00000553683 KAT2AQ92830 837 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms