RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 KDM1BQ8NB78 822 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 JPH3Q8WXH2 748 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-203ENST00000552875 PTPRN2Q92932 1015 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 INTS4Q96HW7 963 aaKnown RBP9.06□□□□□ -0.96
PRKCH-203ENST00000552875 TMX3Q96JJ7 454 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 B3GNT5Q9BYG0 378 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 TMEM30AQ9NV96 361 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 ERRFI1Q9UJM3 462 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-203ENST00000552875 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
PRKCH-203ENST00000552875 STYXL1Q9Y6J8 313 aa9.06□□□□□ -0.96
PRKCH-203ENST00000552875 MTORP42345 2549 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 C9orf172C9J069 976 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 WNT7AO00755 349 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PLRG1O43660 514 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 TNNC2P02585 160 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 KLKB1P03952 638 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 CSF2P04141 144 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PRKAR1AP10644 381 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 NME1P15531 152 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 ITGB7P26010 798 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 HOXD9P28356 352 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 RECQLP46063 649 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 TNNC1P63316 161 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 CDC20Q12834 499 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 ARID5BQ14865 1188 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 DEFB133Q30KQ1 61 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 FAM46CQ5VWP2 391 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 CEP135Q66GS9 1140 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PARGQ86W56 976 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 DIS3L2Q8IYB7 885 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 TMEM145Q8NBT3 493 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 BTN2A2Q8WVV5 523 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 NKD1Q969G9 470 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 SLC45A3Q96JT2 553 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 CGRRF1Q99675 332 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 FAM213AQ9BRX8 229 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 BOCQ9BWV1 1114 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 UNKQ9C0B0 810 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 MTMR12Q9C0I1 747 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 RBAKQ9NYW8 714 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 IPO11Q9UI26 975 aaKnown RBP9.05□□□□□ -0.96
PRKCH-203ENST00000552875 STRIP2Q9ULQ0 834 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PPM1HQ9ULR3 514 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 SCML2Q9UQR0 700 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 HIVEP1P15822 2718 aa9.05□□□□□ -0.96
PRKCH-203ENST00000552875 A6NNZ2 444 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 ANKRD63C9JTQ0 380 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 MDM4O15151 490 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 SLC31A1O15431 190 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 PFKFB2O60825 505 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 AP1G2O75843 785 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 FAM13AO94988 1023 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 RPLP0P05388 317 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 HOXB4P17483 251 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 TRIM21P19474 475 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 HNRNPA2B1P22626 353 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CCDC15Q0P6D6 951 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 ELAVL3Q14576 367 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 ME3Q16798 604 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 DEFB109BQ30KR1 87 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 ZNF542PQ5EBM4 170 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 C9orf64Q5T6V5 341 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 GDF7Q7Z4P5 450 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 KIAA0907Q7Z7F0 614 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 SYT2Q8N9I0 419 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 OR6C4Q8NGE1 309 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CXorf38Q8TB03 319 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 LMX1AQ8TE12 382 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 TMA16Q96EY4 203 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 TNIP3Q96KP6 325 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
PRKCH-203ENST00000552875 MTG2Q9H4K7 406 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 PARVGQ9HBI0 331 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 KRT82Q9NSB4 513 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 RASAL2Q9UJF2 1139 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 NAGPAQ9UK23 515 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 CA5BQ9Y2D0 317 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 MAP4K5Q9Y4K4 846 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 NAV3Q8IVL0 2385 aa9.04□□□□□ -0.96
PRKCH-203ENST00000552875 SPG11Q96JI7 2443 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-203ENST00000552875 TCP11X1B4DZS4 312 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 NKX2-8O15522 239 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 JAK2O60674 1132 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 ANXA6P08133 673 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 HMBSP08397 361 aa9.03□□□□□ -0.96
PRKCH-203ENST00000552875 DRD2P14416 443 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms