RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 M0QYT0 321 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 MYO1FO00160 1098 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 RNF8O76064 485 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 GJB6O95452 261 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ADH1CP00326 375 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 HARS2P49590 506 aaKnown RBP11.78□□□□□ -0.52
TMEM116-218ENST00000552839 VAV2P52735 878 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 TBX4P57082 545 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 COG7P83436 770 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ATP11AP98196 1134 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 DEUP1Q05D60 604 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 PTP4A2Q12974 167 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 TAF5Q15542 800 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ZFYVE27Q5T4F4 411 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 SNX30Q5VWJ9 437 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 CCNI2Q6ZMN8 369 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-218ENST00000552839 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ETFBKMTQ8IXQ9 262 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ZNF513Q8N8E2 541 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-218ENST00000552839 NAT16Q8N8M0 369 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 RXFP2Q8WXD0 754 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 CALCOCO1Q9P1Z2 691 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 HCN2Q9UL51 889 aa11.78□□□□□ -0.52
TMEM116-218ENST00000552839 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CCP110O43303 1012 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 ZSCAN12O43309 604 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 MSI1O43347 362 aaKnown RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 KRT86O43790 486 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TRUB2O95900 331 aaKnown RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TBX18O95935 607 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 MOCS2O96007 188 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CYP1A2P05177 515 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 SYPP08247 313 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 FTH1P19P0C7X4 201 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 SLC2A3P11169 496 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 FLT3P36888 993 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 WASP42768 502 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CCZ1BP86790 482 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CCZ1P86791 482 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 GAD2Q05329 585 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 SLC14A1Q13336 389 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 MAMLD1Q13495 774 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 ARL13BQ3SXY8 428 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 ODF2Q5BJF6 829 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 PLEKHA7Q6IQ23 1121 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 KLHDC10Q6PID8 442 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 BEND5Q7L4P6 421 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TAC4Q86UU9 113 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TMEM139Q8IV31 216 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 MDM1Q8TC05 714 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 HNRNPLLQ8WVV9 542 aaKnown RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 PLD4Q96BZ4 506 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 BBC3Q96PG8 261 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 SLC2A13Q96QE2 648 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 DCLK3Q9C098 648 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CCDC86Q9H6F5 360 aaKnown RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 CD248Q9HCU0 757 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TMEM51Q9NW97 253 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 OSER1Q9NX31 292 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 TBC1D14Q9P2M4 693 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
TMEM116-218ENST00000552839 PCDHB9Q9Y5E1 797 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
TMEM116-218ENST00000552839 A0A1W2PQF6 199 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 E2F8A0AVK6 867 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 MACROD2A1Z1Q3 448 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 TYW5A2RUC4 315 aaKnown RBP11.76□□□□□ -0.53
TMEM116-218ENST00000552839 TRIM24O15164 1050 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 TULP3O75386 442 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 GABBR2O75899 941 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 LCA5LO95447 670 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 F9P00740 461 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 HOXB2P14652 356 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 RFC1P35251 1148 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-218ENST00000552839 GJC1P36383 396 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 TRIP4Q15650 581 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-218ENST00000552839 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 SLC25A52Q3SY17 297 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 MSANTD2Q6P1R3 559 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 BHLHA9Q7RTU4 235 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
TMEM116-218ENST00000552839 SLCO6A1Q86UG4 719 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 NAXDQ8IW45 347 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 UNC45BQ8IWX7 931 aa11.76□□□□□ -0.53
TMEM116-218ENST00000552839 ATP6V0D2Q8N8Y2 350 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms