RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ASCL5Q7RTU5 278 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 SETD3Q86TU7 594 aaPredicted RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 APCDD1Q8J025 514 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 CTNNBL1Q8WYA6 563 aaPredicted RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 TBC1D31Q96DN5 1066 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 EPAS1Q99814 870 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 NUP85Q9BW27 656 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 PPARGC1AQ9UBK2 798 aaKnown RBP19■□□□□ 0.63
PRPF40B-216ENST00000552301 SUN2Q9UH99 717 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 SLC25A13Q9UJS0 675 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 ERVW-1Q9UQF0 538 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 TBC1D30Q9Y2I9 924 aa19■□□□□ 0.63
PRPF40B-216ENST00000552301 SPAG17Q6Q759 2223 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 PRPSAP2O60256 369 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 SRPRAP08240 638 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 NDUFV2P19404 249 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 NUMBP49757 651 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 TBX2Q13207 712 aaPredicted RBP18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 ELF2Q15723 593 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF366Q8N895 744 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 SUMF1Q8NBK3 374 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 TMEM245Q9H330 911 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 FBRSQ9HAH7 460 aa18.99■□□□□ 0.63
PRPF40B-216ENST00000552301 CKAP5Q14008 2032 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 LRIG2O94898 1065 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 H2AFZP0C0S5 128 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 CTSOP43234 321 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 PLK1P53350 603 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 GALCP54803 685 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 KRT83P78385 493 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 LAIR1Q6GTX8 287 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 H2AFVQ71UI9 128 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 KDM1BQ8NB78 822 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 OR2T3Q8NH03 318 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 MRGPRX1Q96LB2 322 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 FEM1AQ9BSK4 669 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 C2orf49Q9BVC5 232 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 TRIM7Q9C029 511 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 NHEJ1Q9H9Q4 299 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 ANAPC7Q9UJX3 599 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 FZD10Q9ULW2 581 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 INVSQ9Y283 1065 aa18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 MUC22E2RYF6 1773 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-216ENST00000552301 EML5Q05BV3 1969 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 DOCK4Q8N1I0 1966 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RIF1Q5UIP0 2472 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM186AA6NE01 2351 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 MAP3K13O43283 966 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CREB3O43889 395 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF217O75362 1048 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CYP1A2P05177 515 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RHOQP17081 205 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 L1CAMP32004 1257 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 ETFBP38117 255 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 MAPKAPK2P49137 400 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF252P-AS1Q0IIN9 211 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 MANEALQ5VSG8 457 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF783Q6ZMS7 281 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CACUL1Q86Y37 369 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 TMPRSS6Q8IU80 811 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RLN3Q8WXF3 142 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RUBCNQ92622 972 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 PRCCQ92733 491 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 SIPA1Q96FS4 1042 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RPL10LQ96L21 214 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CHP1Q99653 195 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 RETREG1Q9H6L5 497 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 PRDM16Q9HAZ2 1276 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CD248Q9HCU0 757 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 CTTNBP2NLQ9P2B4 639 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 PCSK1NQ9UHG2 260 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 IP6K2Q9UHH9 426 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 AP4E1Q9UPM8 1137 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 GPR179Q6PRD1 2367 aa18.97■□□□□ 0.63
PRPF40B-216ENST00000552301 SDK1Q7Z5N4 2213 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ILVBLA1L0T0 632 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM72CH0Y354 149 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 MYO1FO00160 1098 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 DCLK1O15075 740 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 RHOBTB1O94844 696 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ACADMP11310 421 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 EPHB2P29323 1055 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 MIPP30301 263 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 P2RY2P41231 377 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 STK19P49842 368 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 TPI1P60174 286 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 CAMK2GQ13555 558 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 PIGHQ14442 188 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ACAP1Q15027 740 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ASTE1Q2TB18 679 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 HNRNPA1L2Q32P51 320 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM72AQ5TYM5 149 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM72DQ6L9T8 149 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 KBTBD6Q86V97 674 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM72BQ86X60 149 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 PYROXD2Q8N2H3 581 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 FAM160A2Q8N612 972 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 DCAF4L2Q8NA75 395 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 OR52K2Q8NGK3 314 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ZNF564Q8TBZ8 553 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms