RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 FIGNQ5HY92 759 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 PEAR1Q5VY43 1037 aaPredicted RBP19.55■□□□□ 0.72
DDX54-208ENST00000551344 MON1BQ7L1V2 547 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 STRADAQ7RTN6 431 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 DGLUCYQ7Z3D6 616 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 FAM131BQ86XD5 332 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 DEFB119Q8N690 84 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 CADM4Q8NFZ8 388 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 NUP205Q92621 2012 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 CENPIQ92674 756 aaPredicted RBP19.55■□□□□ 0.72
DDX54-208ENST00000551344 ALG14Q96F25 216 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 VCPIP1Q96JH7 1222 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 SYT11Q9BT88 431 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 SELENOOQ9BVL4 669 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 TMEM74BQ9NUR3 256 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 SLCO3A1Q9UIG8 710 aa19.55■□□□□ 0.72
DDX54-208ENST00000551344 ITIH6Q6UXX5 1313 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 IGLV3-10A0A075B6K4 115 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 LRRC53A6NM62 1247 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 ITPKAP23677 461 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 RFC1P35251 1148 aaPredicted RBP19.54■□□□□ 0.72
DDX54-208ENST00000551344 GGCXP38435 758 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 IRAK1P51617 712 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 RPS14P62263 151 aaKnown RBP19.54■□□□□ 0.72
DDX54-208ENST00000551344 SYCP2LQ5T4T6 812 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 SFMBT2Q5VUG0 894 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 TCEAL6Q6IPX3 200 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 WDR59Q6PJI9 974 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 RABEPKQ7Z6M1 372 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 SLC41A1Q8IVJ1 513 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 JOSD2Q8TAC2 188 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 CEP76Q8TAP6 659 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 TCEAL3Q969E4 200 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 TTYH3Q9C0H2 523 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 RSPH9Q9H1X1 276 aaPredicted RBP19.54■□□□□ 0.72
DDX54-208ENST00000551344 RXFP3Q9NSD7 469 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 SCML1Q9UN30 329 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 OR51B4Q9Y5P0 310 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 DCHS1Q96JQ0 3298 aa19.54■□□□□ 0.72
DDX54-208ENST00000551344 EDDM13A0A1B0GTR0 161 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 TTC34A8MYJ7 566 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 E9PAM4 449 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 RNASEH1O60930 286 aaKnown RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 SIN3BO75182 1162 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 CNTN5O94779 1100 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 DNTTP04053 509 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 ADRA1BP35368 520 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 PRKCIP41743 596 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 UBASH3AP57075 661 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 IRX4P78413 519 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 SFSWAPQ12872 951 aaKnown RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 ASIC2Q16515 512 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 DUOXA1Q1HG43 343 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 C15orf59Q2T9L4 293 aaPredicted RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 ALFQ53S48 1182 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 WDR45BQ5MNZ6 344 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 C9orf64Q5T6V5 341 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 ZNF776Q68DI1 518 aaPredicted RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 SETD3Q86TU7 594 aaPredicted RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 MCOLN2Q8IZK6 566 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 RPL10LQ96L21 214 aaKnown RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 HSPA12BQ96MM6 686 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 GPR174Q9BXC1 333 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 NUSAP1Q9BXS6 441 aaKnown RBP19.53■□□□□ 0.72
DDX54-208ENST00000551344 TMPRSS4Q9NRS4 437 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 SNX10Q9Y5X0 201 aa19.53■□□□□ 0.72
DDX54-208ENST00000551344 TCRBV5S1A1TA0A578 114 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 ANKRD62A6NC57 917 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 PATE3B3GLJ2 98 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 SRGAP2O75044 1071 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 GJB6O95452 261 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 GZMAP12544 262 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 GPD1P21695 349 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 NRG1Q02297 640 aaPredicted RBP19.52■□□□□ 0.72
DDX54-208ENST00000551344 CDO1Q16878 200 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 TTC31Q49AM3 519 aaPredicted RBP19.52■□□□□ 0.72
DDX54-208ENST00000551344 TRIM61Q5EBN2 209 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 SH3PXD2AQ5TCZ1 1133 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 STPG1Q5TH74 334 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 DNAJC24Q6P3W2 148 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 OR52K2Q8NGK3 314 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 PTPRN2Q92932 1015 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 OSBPL2Q9H1P3 480 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 PCED1AQ9H1Q7 454 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 MTG2Q9H4K7 406 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 HAUS4Q9H6D7 363 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 RETREG1Q9H6L5 497 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 PPARGC1AQ9UBK2 798 aaKnown RBP19.52■□□□□ 0.72
DDX54-208ENST00000551344 VPS28Q9UK41 221 aa19.52■□□□□ 0.72
DDX54-208ENST00000551344 MUC22E2RYF6 1773 aaPredicted RBP19.52■□□□□ 0.71
DDX54-208ENST00000551344 LNP1A1A4G5 178 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 METTL12A8MUP2 240 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 KRT83P78385 493 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 ARTNQ5T4W7 220 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 C6orf118Q5T5N4 469 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 IL31Q6EBC2 164 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 LRSAM1Q6UWE0 723 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 CACUL1Q86Y37 369 aa19.51■□□□□ 0.71
DDX54-208ENST00000551344 RGL4Q8IZJ4 473 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms