RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 KDM1BQ8NB78 822 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 FRS2Q8WU20 508 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 PTPRN2Q92932 1015 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 CFAP57Q96MR6 1250 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ERGIC2Q96RQ1 377 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 PSMB7Q99436 277 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 NUP58Q9BVL2 599 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 FBRSQ9HAH7 460 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ZNF212Q9UDV6 495 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 WASF3Q9UPY6 502 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
NPAS3-209ENST00000551008 CACNA1BQ00975 2339 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 TYW5A2RUC4 315 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 ARHGAP33O14559 1287 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 MBD3O95983 291 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SRPRAP08240 638 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 UNGP13051 313 aaPredicted RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 OXTRP30559 389 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 METAP1P53582 386 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 ECT2LQ008S8 904 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 GRIK2Q13002 908 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 UAP1L1Q3KQV9 507 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SLC25A52Q3SY17 297 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 BRMS1LQ5PSV4 323 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 TTC39BQ5VTQ0 682 aaPredicted RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 ZNF776Q68DI1 518 aaPredicted RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 ZNF677Q86XU0 584 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 ZCCHC9Q8N567 271 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 MINDY1Q8N5J2 469 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 EMC1Q8N766 993 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 JOSD2Q8TAC2 188 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 CEP76Q8TAP6 659 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 FOXJ1Q92949 421 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 RPRD1AQ96P16 312 aaPredicted RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 FEM1AQ9BSK4 669 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 TKTL2Q9H0I9 626 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 PABPC3Q9H361 631 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 EIF2B4Q9UI10 523 aaKnown RBP13.42□□□□□ -0.26
NPAS3-209ENST00000551008 TBC1D30Q9Y2I9 924 aa13.42□□□□□ -0.26
NPAS3-209ENST00000551008 IGLV3-10A0A075B6K4 115 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 TCRBV5S1A1TA0A578 114 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 MID1O15344 667 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 TEX33O43247 280 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ENDOD1O94919 500 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 IGHV4-34P06331 123 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ACADMP11310 421 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 CD59P13987 128 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 CSRP1P21291 193 aaKnown RBP13.41□□□□□ -0.26
NPAS3-209ENST00000551008 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ZBTB16Q05516 673 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 DEUP1Q05D60 604 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 SLC12A1Q13621 1099 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 CST6Q15828 149 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 FKBP15Q5T1M5 1219 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 DAB2IPQ5VWQ8 1189 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ARCQ7LC44 396 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 RGL4Q8IZJ4 473 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 STK40Q8N2I9 435 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 AADATQ8N5Z0 425 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 DEFB124Q8NES8 71 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 RNF34Q969K3 372 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 BIRC7Q96CA5 298 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 CNTNAP3BQ96NU0 1288 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 C11orf70Q9BRQ4 267 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 CNTNAP3Q9BZ76 1288 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 MAGEB5Q9BZ81 275 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 SIK2Q9H0K1 926 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 PCED1AQ9H1Q7 454 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
NPAS3-209ENST00000551008 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 NEU3Q9UQ49 428 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.41□□□□□ -0.26
NPAS3-209ENST00000551008 IGF2RP11717 2491 aa13.41□□□□□ -0.26
NPAS3-209ENST00000551008 EDDM13A0A1B0GTR0 161 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 DRGXA6NNA5 263 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 MEI4A8MW99 385 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 UPK3BL1B0FP48 263 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 UPK3BL2E5RIL1 263 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 RNF103O00237 685 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 SNAP91O60641 907 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 SEMA4FO95754 770 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 TOP3BO95985 862 aaKnown RBP13.4□□□□□ -0.26
NPAS3-209ENST00000551008 DRD3P35462 400 aa13.4□□□□□ -0.26
NPAS3-209ENST00000551008 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms