RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CEP83Q9Y592 693 aa22.4■■□□□ 1.18
SMARCC2-210ENST00000550519 GOLGA4Q13439 2230 aaKnown RBP22.39■■□□□ 1.18
SMARCC2-210ENST00000550519 TRABD2BA6NFA1 517 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 KCNU1A8MYU2 1149 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 F5H5T6 163 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 WNT9AO14904 365 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 CD38P28907 300 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 PSMD8P48556 350 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 STK19P49842 368 aaPredicted RBP22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 ADPRHP54922 357 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 PAK1Q13153 545 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 SHBQ15464 509 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 TAF5Q15542 800 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 CCAR2Q8N163 923 aaKnown RBP22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 ATP6V0D2Q8N8Y2 350 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 FTSJ1Q9UET6 329 aa22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 TPX2Q9ULW0 747 aaKnown RBP22.39■■□□□ 1.17
SMARCC2-210ENST00000550519 ADAMTS20P59510 1910 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 BIN1O00499 593 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 THAP12O43422 761 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 MZF1P28698 734 aaPredicted RBP22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 GNA15P30679 374 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 NNMTP40261 264 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 PLK1P53350 603 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 PDCLQ13371 301 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 ELAVL3Q14576 367 aaKnown RBP22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 COL28A1Q2UY09 1125 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 ENOSF1Q7L5Y1 443 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 GATAD2AQ86YP4 633 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 OR14C36Q8NHC7 312 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 SAP25Q8TEE9 199 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 FAM131CQ96AQ9 280 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 AASDHPPTQ9NRN7 309 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC12A6Q9UHW9 1150 aa22.38■■□□□ 1.17
SMARCC2-210ENST00000550519 FAM149AA5PLN7 773 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 VAV1P15498 845 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 PDGFRAP16234 1089 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 DRD3P35462 400 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 VASPP50552 380 aaPredicted RBP22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 SULT2A1Q06520 285 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 CYP4F3Q08477 520 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 TTC39BQ5VTQ0 682 aaPredicted RBP22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 DHRS13Q6UX07 377 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 CIR1Q86X95 450 aaPredicted RBP22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 FRS2Q8WU20 508 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC2A13Q96QE2 648 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 PCDHGA1Q9Y5H4 931 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 CELSR3Q9NYQ7 3312 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 PLXNA2O75051 1894 aa22.37■■□□□ 1.17
SMARCC2-210ENST00000550519 URB1O60287 2271 aaKnown RBP22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 A0A1B0GVM2 712 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 TCAF2A6NFQ2 919 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 BECN2A8MW95 431 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 LATO43561 262 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 IL1BP01584 269 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 GLI1P08151 1106 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC2A3P11169 496 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 CDK17Q00537 523 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 CCDC157Q569K6 752 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 CXorf57Q6NSI4 855 aaKnown RBP22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 GJB7Q6PEY0 223 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 TRIM65Q6PJ69 517 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 PDZD3Q86UT5 571 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 WDTC1Q8N5D0 677 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 PDCD7Q8N8D1 485 aaKnown RBP22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 ALG14Q96F25 216 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 SERAC1Q96JX3 654 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 SPAG5Q96R06 1193 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 SCUBE2Q9NQ36 999 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 GDF3Q9NR23 364 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 ASNSD1Q9NWL6 643 aa22.36■■□□□ 1.17
SMARCC2-210ENST00000550519 KNTC1P50748 2209 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 YKT6O15498 198 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 ABCB4P21439 1286 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 CCR1P32246 355 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 NUMBP49757 651 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 OXCT1P55809 520 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 NXPH1P58417 271 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 PPP2CBP62714 309 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 PPP2CAP67775 309 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 RABGAP1LQ5R372 815 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 FBXL22Q6P050 247 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 TMPRSS12Q86WS5 348 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 DEFB106AQ8N104 65 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 HNRNPLLQ8WVV9 542 aaKnown RBP22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 FAM81BQ96LP2 452 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 CPXM1Q96SM3 734 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 CRACR2AQ9BSW2 395 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 KDM4CQ9H3R0 1056 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 FAM204AQ9H8W3 233 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 DDIT4Q9NX09 232 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 ARHGAP20Q9P2F6 1191 aa22.35■■□□□ 1.17
SMARCC2-210ENST00000550519 COL5A1P20908 1838 aaPredicted RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3DA0A087WVF3 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3IA0A087WXS9 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3EA0A087X179 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3KA0A087X1G2 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3FA6NER0 549 aaPredicted RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3LB9A6J9 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 E9PAM4 449 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms