RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 BRD3Q15059 726 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 EP400NLQ6ZTU2 488 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CHST9Q7L1S5 443 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 LRRC49Q8IUZ0 686 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ARHGAP12Q8IWW6 846 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 BBS7Q8IWZ6 715 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 NPAS3Q8IXF0 933 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 TP53INP2Q8IXH6 220 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CPXM2Q8N436 756 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ATPAF2Q8N5M1 289 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CELF5Q8N6W0 485 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 EIF1ADQ8N9N8 165 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 BBOF1Q8ND07 529 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 LRRN4Q8WUT4 740 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 HTR3CQ8WXA8 447 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 LRRC45Q96CN5 670 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 HDAC11Q96DB2 347 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 RTP4Q96DX8 246 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 TMA16Q96EY4 203 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 SNF8Q96H20 258 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 SLC39A8Q9C0K1 460 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 NDFIP2Q9NV92 336 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ARGLU1Q9NWB6 273 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 HELZP42694 1942 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 VCANP13611 3396 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ARHGAP42A6NI28 874 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 GFRA2O00451 464 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 NDC80O14777 642 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 RAMP2O60895 175 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 TBL1XO60907 577 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CYBBP04839 570 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ZSCAN5DPP0CG00 497 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ETS1P14921 441 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 VAV1P15498 845 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CCNCP24863 283 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 RPL22P35268 128 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 RPL21P46778 160 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 PAPOLAP51003 745 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 SGSHP51688 502 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 YBEYP58557 167 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 GPS1Q13098 491 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 USP4Q13107 963 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CALCOCO2Q13137 446 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ZNF177Q13360 481 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 HLTFQ14527 1009 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 POLD3Q15054 466 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 TRADDQ15628 312 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ZNF77Q15935 545 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 P3H1Q32P28 736 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 PARP15Q460N3 678 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 MPPE1Q53F39 396 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 C4orf22Q6V702 233 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 GET4Q7L5D6 327 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 PRUNE1Q86TP1 453 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CCDC13Q8IYE1 715 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 TDRD5Q8NAT2 981 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 GLIS1Q8NBF1 620 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 FGF13Q92913 245 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 P2RY11Q96G91 374 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 RIPOR3Q96MK2 946 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 GAS2L1Q99501 681 aaPredicted RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 S1PR5Q9H228 398 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 NOL6Q9H6R4 1146 aaKnown RBP11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 SEPT10Q9P0V9 454 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 WHRNQ9P202 907 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 PAK5Q9P286 719 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 TBC1D14Q9P2M4 693 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 ZNF212Q9UDV6 495 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 CHD7Q9P2D1 2997 aa11.83□□□□□ -0.52
CTDSP2-206ENST00000550144 SPTBN5Q9NRC6 3674 aaKnown RBP11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 C2orf16Q68DN1 1984 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 CCDC151A5D8V7 595 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 RASA4BC9J798 803 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 RNF103O00237 685 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 SLC9A3R1O14745 358 aaPredicted RBP11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 RASA4O43374 803 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 TBX10O75333 385 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 GCATO75600 419 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 RHOCP08134 193 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 ITIH2P19823 946 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 MTHFRP42898 656 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 CAV1Q03135 178 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 FAM78AQ5JUQ0 283 aa11.82□□□□□ -0.52
CTDSP2-206ENST00000550144 MPP7Q5T2T1 576 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms