RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 STRIP2Q9ULQ0 834 aa8.97□□□□□ -0.97
AC055716.1-201ENST00000550077 SCML1Q9UN30 329 aa8.97□□□□□ -0.97
AC055716.1-201ENST00000550077 RP1P56715 2156 aa8.97□□□□□ -0.97
AC055716.1-201ENST00000550077 RELNP78509 3460 aa8.96□□□□□ -0.97
AC055716.1-201ENST00000550077 NBPF19A0A087WUL8 3843 aa8.96□□□□□ -0.97
AC055716.1-201ENST00000550077 PIK3R2O00459 728 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 PIAS2O75928 621 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 LETM1O95202 739 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 ZBED1O96006 694 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 TRIM49P0CI25 452 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 TRIM49CP0CI26 452 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 WT1P19544 449 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 MZF1P28698 734 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 PIK3CAP42336 1068 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 HARS2P49590 506 aaKnown RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 RAD23BP54727 409 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CLDN2P57739 230 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CYP4F2P78329 520 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 PPP3CAQ08209 521 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 KCNMA1Q12791 1236 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CNTN1Q12860 1018 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 STAT4Q14765 748 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CDKN3Q16667 212 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 FOXD4L6Q3SYB3 417 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 PERM1Q5SV97 790 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 BSPRYQ5W0U4 402 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 GUSBP11Q6P575 273 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 FOXD4L3Q6VB84 417 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 STXBP4Q6ZWJ1 553 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 MFN1Q8IWA4 741 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 GRAMD1CQ8IYS0 662 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 LSMEM2Q8N112 164 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CARNMT1Q8N4J0 409 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 OR13H1Q8NG92 308 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 FIBINQ8TAL6 211 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 IFI44Q8TCB0 444 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CLEC4CQ8WTT0 213 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 SEMA4DQ92854 862 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 DHX58Q96C10 678 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 SPATA32Q96LK8 384 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 THSD1Q9NS62 852 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 WDR70Q9NW82 654 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 TFIP11Q9UBB9 837 aaKnown RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 KLF15Q9UIH9 416 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 CFAP45Q9UL16 551 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 HEMK1Q9Y5R4 338 aaPredicted RBP8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 ITIH6Q6UXX5 1313 aa8.96□□□□□ -0.98
AC055716.1-201ENST00000550077 EDDM13A0A1B0GTR0 161 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 SYCE3A1L190 88 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 K7ESM1 405 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 SLC31A1O15431 190 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 PLRG1O43660 514 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 RNASEH1O60930 286 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 CALCAP01258 141 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 IGLV3-27P01718 113 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 RPN1P04843 607 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 THEGLP0DJG4 465 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 C5AR1P21730 350 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TXLNAP40222 546 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 GCLMP48507 274 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 NASPP49321 788 aaPredicted RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 ST8SIA6P61647 398 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TLE1Q04724 770 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 ADIGQ0VDE8 80 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 SFSWAPQ12872 951 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 STK4Q13043 487 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 CUL4BQ13620 913 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 E2F5Q15329 346 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 IGFBP7Q16270 282 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 KNOP1Q1ED39 458 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 SLC45A4Q5BKX6 768 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TPRG1LQ5T0D9 272 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 AGBL4Q5VU57 503 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 OR6B2Q6IFH4 312 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 ATG14Q6ZNE5 492 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 PRPF39Q86UA1 669 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 OXR1Q8N573 874 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TMEM145Q8NBT3 493 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 UBA3Q8TBC4 463 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 MAPK15Q8TD08 544 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 FRS2Q8WU20 508 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 KLHDC7BQ96G42 594 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 ZNF396Q96N95 335 aaPredicted RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 CDK5RAP1Q96SZ6 601 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 FUCA2Q9BTY2 467 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TNMDQ9H2S6 317 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 MMRN2Q9H8L6 949 aa8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 HBS1LQ9Y450 684 aaKnown RBP8.95□□□□□ -0.98
AC055716.1-201ENST00000550077 TARSL2A2RTX5 802 aaKnown RBP8.94□□□□□ -0.98
AC055716.1-201ENST00000550077 CPED1A4D0V7 1026 aa8.94□□□□□ -0.98
AC055716.1-201ENST00000550077 AGRPO00253 132 aa8.94□□□□□ -0.98
AC055716.1-201ENST00000550077 KLRC4O43908 158 aa8.94□□□□□ -0.98
AC055716.1-201ENST00000550077 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms