RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 TDP1Q9NUW8 608 aa28.42■■■□□ 2.14
GNPTAB-206ENST00000549940 C5orf60A6NFR6 353 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 GREM1O60565 184 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 TSPAN3O60637 253 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 GCATO75600 419 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 VAV1P15498 845 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 LRIT3Q3SXY7 679 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 PCGF5Q86SE9 256 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 ING5Q8WYH8 240 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 ART4Q93070 314 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 MYEOVQ96EZ4 313 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 FMO2Q99518 471 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 LMCD1Q9NZU5 365 aa28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 TPX2Q9ULW0 747 aaKnown RBP28.41■■■□□ 2.14
GNPTAB-206ENST00000549940 DNALI1O14645 258 aaPredicted RBP28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 SCAMP3O14828 347 aaKnown RBP28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 CLDN11O75508 207 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 CEBPBP17676 345 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 ECHS1P30084 290 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 ITGA8P53708 1063 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 NRLP54845 237 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 BEND6Q5SZJ8 279 aaPredicted RBP28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 AFMIDQ63HM1 303 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 CCDC13Q8IYE1 715 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 FBXO25Q8TCJ0 367 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 ZDHHC18Q9NUE0 388 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 DOCK4Q8N1I0 1966 aa28.4■■■□□ 2.14
GNPTAB-206ENST00000549940 A0A1W2PPC1 479 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 ARHGAP42A6NI28 874 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 RAMP2O60895 175 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 CHKAP35790 457 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 RPS24P62847 133 aaKnown RBP28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 ARHGEF18Q6ZSZ5 1173 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 CCDC110Q8TBZ0 833 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 PRICKLE1Q96MT3 831 aaPredicted RBP28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 TSGA13Q96PP4 275 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 NEUROG2Q9H2A3 272 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 NUP205Q92621 2012 aa28.39■■■□□ 2.14
GNPTAB-206ENST00000549940 NOTCH4Q99466 2003 aa28.39■■■□□ 2.13
GNPTAB-206ENST00000549940 E2F8A0AVK6 867 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 RNF103O00237 685 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 CCNCP24863 283 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 TNNT3P45378 269 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 PAPOLAP51003 745 aaKnown RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 ZDHHC24Q6UX98 284 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 CHST9Q7L1S5 443 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 ITFG1Q8TB96 612 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 USP13Q92995 863 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 TMA16Q96EY4 203 aaKnown RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 CCL26Q9Y258 94 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 A0A0A0MRY4 1105 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 A0A1B0GVM2 712 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 TCAF2A6NFQ2 919 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 GLP2RO95838 553 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 YBEYP58557 167 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 POLD3Q15054 466 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 PARP15Q460N3 678 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 TIGD7Q6NT04 549 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 ANKRD54Q6NXT1 300 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 GPR149Q86SP6 731 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 ZNF354CQ86Y25 554 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 HJURPQ8NCD3 748 aaPredicted RBP28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 DEPDC1BQ8WUY9 529 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 SPATA13Q96N96 652 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 ZNF212Q9UDV6 495 aa28.38■■■□□ 2.13
GNPTAB-206ENST00000549940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 RASA4BC9J798 803 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 KCNK1O00180 336 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 LINC01565O15544 149 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 RASA4O43374 803 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 OPHN1O60890 802 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 BASP1P80723 227 aaKnown RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 ZNF177Q13360 481 aaPredicted RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 CBX2Q14781 532 aaPredicted RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 ANKRD20A2Q5SQ80 823 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 C6orf118Q5T5N4 469 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 ANKRD20A1Q5TYW2 823 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 ANKRD20A3Q5VUR7 823 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 BBS7Q8IWZ6 715 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 FAM217AQ8IXS0 508 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 TAB3Q8N5C8 712 aaPredicted RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 CAVIN3Q969G5 261 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 APOL5Q9BWW9 433 aa28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 NOL6Q9H6R4 1146 aaKnown RBP28.37■■■□□ 2.13
GNPTAB-206ENST00000549940 FAM153BP0C7A2 387 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 HOXB8P17481 243 aaPredicted RBP28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 FSHRP23945 695 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 MORF4L2Q15014 288 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 FAM153CQ494X1 144 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 ARID3BQ8IVW6 561 aaPredicted RBP28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 PPIL6Q8IXY8 311 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 CPXM2Q8N436 756 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 ZSWIM3Q96MP5 696 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 GDAP1L1Q96MZ0 367 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 VAT1Q99536 393 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 TSPYL1Q9H0U9 437 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 ADAM7Q9H2U9 754 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 RAB6BQ9NRW1 208 aa28.36■■■□□ 2.13
GNPTAB-206ENST00000549940 FAM153AQ9UHL3 310 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms