RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 RHBDF2Q6PJF5 856 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 MFSD7Q6UXD7 560 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 NLRP14Q86W24 1093 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 TMEM25Q86YD3 366 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 AHI1Q8N157 1196 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PYROXD2Q8N2H3 581 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 BBS5Q8N3I7 341 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 RIN3Q8TB24 985 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ACTRT1Q8TDG2 376 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ALG3Q92685 438 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 P3H4Q92791 437 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 WBP2Q969T9 261 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ACDQ96AP0 544 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PRICKLE1Q96MT3 831 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 OSBPL9Q96SU4 736 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PNKPQ96T60 521 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PLA2G2FQ9BZM2 168 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 RAB6CQ9H0N0 254 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 EBF3Q9H4W6 596 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ANLNQ9NQW6 1124 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PACSIN2Q9UNF0 486 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 NUP205Q92621 2012 aa10.02□□□□□ -0.8
SMARCD1-206ENST00000549274 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 C3orf70A6NLC5 250 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM72CH0Y354 149 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 I6L893 689 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ENC1O14682 589 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 MCF2LO15068 1137 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 CEP104O60308 925 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 CST8O60676 142 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ATP1A1P05023 1023 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PYGBP11216 843 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PYGMP11217 842 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ARSAP15289 507 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 GJA4P35212 333 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 GRIA2P42262 883 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 DNA2P51530 1060 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PLK1P53350 603 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 RPS24P62847 133 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 RFTN1Q14699 578 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 HSF5Q4G112 596 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ATP13A4Q4VNC1 1196 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 DNTTIP2Q5QJE6 756 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM72AQ5TYM5 149 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 KAZNQ674X7 775 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM72DQ6L9T8 149 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 RETSATQ6NUM9 610 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 TRMT11Q7Z4G4 463 aaKnown RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 C14orf80Q86SX3 495 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM72BQ86X60 149 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ETFBKMTQ8IXQ9 262 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 GJD3Q8N144 294 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 RASGEF1CQ8N431 466 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 DCAF4L2Q8NA75 395 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 MNS1Q8NEH6 495 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 PCDH19Q8TAB3 1148 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FATE1Q969F0 183 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 IGSF8Q969P0 613 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ASIC4Q96FT7 647 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF599Q96NL3 588 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 LRRC3BQ96PB8 259 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 WDR24Q96S15 920 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 NELL2Q99435 816 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 MUC3BQ9H195 1237 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 LINC00597Q9H2U6 94 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 HPS4Q9NQG7 708 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 KLHL11Q9NVR0 708 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 WNT16Q9UBV4 365 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 AMACRQ9UHK6 382 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FEZ2Q9UHY8 353 aaPredicted RBP10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 SLC25A13Q9UJS0 675 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 FBXO10Q9UK96 956 aa10.02□□□□□ -0.81
SMARCD1-206ENST00000549274 TCF20Q9UGU0 1960 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 CFAP69A5D8W1 941 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TRDMT1O14717 391 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TULP3O75386 442 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 STK10O94804 968 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 PABPC1P11940 636 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 POLR2EP19388 210 aaKnown RBP10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 AMPD1P23109 780 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 IL4RP24394 825 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 CTHP32929 405 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 GGCXP38435 758 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 TNFRSF4P43489 277 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 MARCKSL1P49006 195 aa10.01□□□□□ -0.81
SMARCD1-206ENST00000549274 VCPP55072 806 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms