RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MTIF2P46199 727 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CLCN3P51790 818 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 EMP3P54852 163 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ZBTB16Q05516 673 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC15Q0P6D6 951 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ZKSCAN8Q15776 578 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FUT10Q6P4F1 479 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 LRRC8BQ6P9F7 803 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM135Q86UB9 458 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CHSY1Q86X52 802 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 UNC45BQ8IWX7 931 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PLD5Q8N7P1 536 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SLC35G2Q8TBE7 412 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RDH11Q8TC12 318 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 BTN2A3PQ96KV6 586 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SENP8Q96LD8 212 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PRR14Q9BWN1 585 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 HDAC8Q9BY41 377 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MCOLN1Q9GZU1 580 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PLAC1Q9HBJ0 212 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PCDHB5Q9Y5E4 795 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 DYNC1LI2O43237 492 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RNGTTO60942 597 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 HARSP12081 509 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ALADP13716 330 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 GSTM2P28161 218 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TKTP29401 623 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 AFMP43652 599 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 BCAR1P56945 870 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 OGDHQ02218 1023 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 KLHL30Q0D2K2 578 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TFDP2Q14188 446 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 LYPLAL1Q5VWZ2 237 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 NCBP2-AS2Q69YL0 99 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 IL31Q6EBC2 164 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF295-AS1Q8N0V1 137 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RTL3Q8N8U3 475 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 OR10T2Q8NGX3 314 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TIFAQ96CG3 184 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TWNKQ96RR1 684 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MRPL45Q9BRJ2 306 aaKnown RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TTPALQ9BTX7 342 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TRABDQ9H4I3 376 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TJP2Q9UDY2 1190 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 TUBGCP4Q9UGJ1 667 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FAM159BA6NKW6 160 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 NRP1O14786 923 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ATF6P18850 670 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 RENBPP51606 427 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MPP3Q13368 585 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CAMK2GQ13555 558 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-212ENST00000549162 MLC1Q15049 377 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PDGFRLQ15198 375 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC40Q4G0X9 1142 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SNAP47Q5SQN1 464 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ERMARDQ5T6L9 678 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SPOCD1Q6ZMY3 1216 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 DENND6BQ8NEG7 585 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CCDC26Q8TAB7 109 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF558Q96NG5 402 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 PSMB7Q99436 277 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 CHP1Q99653 195 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 SYT15Q9BQS2 421 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 FAM213AQ9BRX8 229 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 ANKMY1Q9P2S6 941 aa5.04□□□□□ -1.6
SCAF11-212ENST00000549162 E9PQ18 207 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PGRMC1O00264 195 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TRAFD1O14545 582 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 FAM153BP0C7A2 387 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 RARGP13631 454 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 NEK3P51956 506 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 NDST1P52848 882 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 DLX5P56178 289 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 RWDD2BP57060 319 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 COG7P83436 770 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 HLTFQ14527 1009 aaKnown RBP eCLIP5.03□□□□□ -1.61e-6■□□□□ 10.4
SCAF11-212ENST00000549162 BEND6Q5SZJ8 279 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 C6orf15Q6UXA7 325 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 C17orf82Q86X59 251 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 RHPN2Q8IUC4 686 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 KSR1Q8IVT5 923 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 UBL4BQ8N7F7 174 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PRELID2Q8N945 189 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 IPMKQ8NFU5 416 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 HEXDCQ8WVB3 486 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 LRCH3Q96II8 777 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF641Q96N77 438 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 OSBPL1AQ9BXW6 950 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 LACRTQ9GZZ8 138 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 RAB33BQ9H082 229 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 GBA3Q9H227 469 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 NOL6Q9H6R4 1146 aaKnown RBP5.03□□□□□ -1.6
SCAF11-212ENST00000549162 PCDH18Q9HCL0 1135 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 MED4Q9NPJ6 270 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 HAUS2Q9NVX0 235 aa5.03□□□□□ -1.6
SCAF11-212ENST00000549162 TEX264Q9Y6I9 313 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms