RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 SULT1E1P49888 294 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 COPB1P53618 953 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 CDH4P55283 916 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 CDR2Q01850 454 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 UBXN1Q04323 297 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 DEUP1Q05D60 604 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 SEMA3BQ13214 749 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 ELAVL3Q14576 367 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 SYCP1Q15431 976 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 C9orf64Q5T6V5 341 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 DSG4Q86SJ6 1040 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 XYLT1Q86Y38 959 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 DHX40Q8IX18 779 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 APCDD1Q8J025 514 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 NEK11Q8NG66 645 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 GANCQ8TET4 914 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 CPA5Q8WXQ8 436 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 FEM1AQ9BSK4 669 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 SIK2Q9H0K1 926 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 MIR1-1HGQ9H1L0 117 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 GANQ9H2C0 597 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 OSGEPQ9NPF4 335 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 FBXL12Q9NXK8 326 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 LIMA1Q9UHB6 759 aaKnown RBP11.73□□□□□ -0.53
BEST3-209ENST00000548658 SLCO3A1Q9UIG8 710 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 SLC25A13Q9UJS0 675 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 ANGPTL2Q9UKU9 493 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 FZD4Q9ULV1 537 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 TBC1D30Q9Y2I9 924 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 HS3ST4Q9Y661 456 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 LRRC72A6NJI9 287 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 LGALS16A8MUM7 142 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 ADH1BP00325 375 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 CYP1A1P04798 512 aaPredicted RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 ZNF18P17022 549 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 C5AR1P21730 350 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 MMP8P22894 467 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 PMLP29590 882 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 AFF3P51826 1226 aaKnown RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 JAM2P57087 298 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 NOMO3P69849 1222 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 KRT83P78385 493 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 SHC2P98077 582 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 TEAD4Q15561 434 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 CST6Q15828 149 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 NAA35Q5VZE5 725 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 CXorf57Q6NSI4 855 aaKnown RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 SETD3Q86TU7 594 aaPredicted RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 IGSF8Q969P0 613 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 RPL10LQ96L21 214 aaKnown RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 OMDQ99983 421 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 NLRC4Q9NPP4 1024 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 EIF2B4Q9UI10 523 aaKnown RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 TMEM59LQ9UK28 342 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 NOCTQ9UK39 431 aaKnown RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 VPS28Q9UK41 221 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.72□□□□□ -0.53
BEST3-209ENST00000548658 NCOR2Q9Y618 2525 aa11.72□□□□□ -0.53
BEST3-209ENST00000548658 DRGXA6NNA5 263 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 TTC34A8MYJ7 566 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 GOLGA8SH3BPF8 625 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 ADCY5O95622 1261 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 CER1O95813 267 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 ZNF883P0CG24 379 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 CD27P26842 260 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 MZF1P28698 734 aaPredicted RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 SLC8A1P32418 973 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 CTSOP43234 321 aaPredicted RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 ARL13BQ3SXY8 428 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 ACCSLQ4AC99 568 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 FAM46CQ5VWP2 391 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 MMAAQ8IVH4 418 aaKnown RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 SNX19Q92543 992 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 PTPRN2Q92932 1015 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 SKA1Q96BD8 255 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 BIRC7Q96CA5 298 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 TBCBQ99426 244 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 C2orf49Q9BVC5 232 aaPredicted RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 MUC3BQ9H195 1237 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 C6orf106Q9H6K1 298 aaPredicted RBP11.71□□□□□ -0.53
BEST3-209ENST00000548658 RETREG1Q9H6L5 497 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
BEST3-209ENST00000548658 MUC22E2RYF6 1773 aaPredicted RBP11.71□□□□□ -0.54
BEST3-209ENST00000548658 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.54
BEST3-209ENST00000548658 SMTNL1A8MU46 457 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 ALOX15BO15296 676 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 MID1O15344 667 aa11.7□□□□□ -0.54
BEST3-209ENST00000548658 ATP9BO43861 1147 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms