RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 DPCR1Q3MIW9 517 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 KCNT1Q5JUK3 1230 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 MIIPQ5JXC2 388 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 RABGAP1LQ5R372 815 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 RNF219Q5W0B1 726 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 DPY19L2P1Q6NXN4 242 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 FBXL22Q6P050 247 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 C11orf57Q6ZUT1 292 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC26A9Q7LBE3 791 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC47A2Q86VL8 602 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 GANCQ8TET4 914 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 PTPRN2Q92932 1015 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 IGSF8Q969P0 613 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC6A18Q96N87 628 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 NOX5Q96PH1 765 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 FAM129BQ96TA1 746 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 CLSTN2Q9H4D0 955 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 TOR4AQ9NXH8 423 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 DNAJC12Q9UKB3 198 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 BTBD3Q9Y2F9 522 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 COL5A1P20908 1838 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 FREM2Q5SZK8 3169 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 A0A1W2PPC4 97 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 FAM47DPA6NHR8 397 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 FOXN3O00409 490 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 VAV1P15498 845 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC8A1P32418 973 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 CLCN1P35523 988 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 GGCXP38435 758 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 CCT8P50990 548 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 PLK1P53350 603 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 ADPRHP54922 357 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 SLCO6A1Q86UG4 719 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 FAM71AQ8IYT1 594 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 STK40Q8N2I9 435 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 OR52K2Q8NGK3 314 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 FRS2Q8WU20 508 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 NEUROG2Q9H2A3 272 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 PLCB1Q9NQ66 1216 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC12A6Q9UHW9 1150 aa17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 APOBEC2Q9Y235 224 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-205ENST00000548650 DOCK4Q8N1I0 1966 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 SRRM3A6NNA2 597 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 H0Y8X5 98 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 DKK1O94907 266 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 ADH1BP00325 375 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 DRD3P35462 400 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 RACK1P63244 317 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 SFSWAPQ12872 951 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 NME3Q13232 169 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 AUHQ13825 339 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 KCNJ12Q14500 433 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 OR6B2Q6IFH4 312 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 ZNF397Q8NF99 534 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 OR2T34Q8NGX1 318 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 RNF34Q969K3 372 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 FAM131CQ96AQ9 280 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 ALG14Q96F25 216 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 RPRD1AQ96P16 312 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 OMDQ99983 421 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 VANGL2Q9ULK5 521 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 HS3ST4Q9Y661 456 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 DMXL2Q8TDJ6 3036 aa17.92■□□□□ 0.46
CHMP1A-205ENST00000548650 LRRC72A6NJI9 287 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 VILLO15195 856 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 PCDHGA12O60330 932 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 PAGE1O75459 146 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 CAPNS1P04632 268 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 C5AR1P21730 350 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 KRT9P35527 623 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 VASPP50552 380 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 CCR5P51681 352 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 METAP1P53582 386 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 OXCT1P55809 520 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC6A3Q01959 620 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 MTA1Q13330 715 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 TPD52L1Q16890 204 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 FAM114A1Q8IWE2 563 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 SPAG5Q96R06 1193 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 CDC6Q99741 560 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 ACE2Q9BYF1 805 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 SYNCQ9H7C4 482 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 PIGVQ9NUD9 493 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 RALYQ9UKM9 306 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 OR51B4Q9Y5P0 310 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 DOCK9Q9BZ29 2069 aa17.91■□□□□ 0.46
CHMP1A-205ENST00000548650 APC2O95996 2303 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 I6L893 689 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 M0QYT0 321 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 KCNK3O14649 394 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 IL1BP01584 269 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 WNT1P04628 370 aa17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 ATXN1LP0C7T5 689 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-205ENST00000548650 GOT1P17174 413 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms