RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 KIAA1257Q9ULG3 409 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 RAP2CQ9Y3L5 183 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 DGKIO75912 1065 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 MPOP05164 745 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 PDK1Q15118 436 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 FAM160B1Q5W0V3 765 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 MAP1SQ66K74 1059 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-206ENST00000548645 CHERPQ8IWX8 916 aaKnown RBP23.61■■□□□ 1.37
NPAS3-206ENST00000548645 RBBP8Q99708 897 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 GATA5Q9BWX5 397 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-206ENST00000548645 DTLQ9NZJ0 730 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 EPS15L1Q9UBC2 864 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 BARX2Q9UMQ3 279 aaPredicted RBP23.61■■□□□ 1.37
NPAS3-206ENST00000548645 HACD1B0YJ81 288 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 MLH1P40692 756 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 SLC6A3Q01959 620 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 SPANXN3Q5MJ09 141 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 MTMR14Q8NCE2 650 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 MID2Q9UJV3 735 aa23.61■■□□□ 1.37
NPAS3-206ENST00000548645 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 ZNF26P17031 533 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 CHRNA5P30532 468 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 RPL14P50914 215 aaKnown RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 RFTN1Q14699 578 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 CROCCP3Q8IVE0 287 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 KLHL32Q96NJ5 620 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 ACAD9Q9H845 621 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 HESX1Q9UBX0 185 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 SQORQ9Y6N5 450 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 ACKR2O00590 384 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 TADA2AO75478 443 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 MPSTP25325 297 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 EPHA3P29320 983 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 NDST1P52848 882 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 DPYSQ14117 519 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 CDR2LQ86X02 465 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 VRTNQ9H8Y1 702 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 NMRAL1Q9HBL8 299 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 ZNF214Q9UL59 606 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 NR2E3Q9Y5X4 410 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 A0A096LPK6 155 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 ACOT8O14734 319 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 RNASEH2AO75792 299 aaKnown RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 PFKMP08237 780 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 LIMK2P53671 638 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 TXNL4AP83876 142 aaKnown RBP23.6■■□□□ 1.37
NPAS3-206ENST00000548645 EEF1DP3Q658K8 133 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 KLHL35Q6PF15 583 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 TRIM67Q6ZTA4 783 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 FNDC8Q8TC99 324 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 CSPG4P5Q96PW8 444 aa23.6■■□□□ 1.37
NPAS3-206ENST00000548645 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.59■■□□□ 1.37
NPAS3-206ENST00000548645 ALDH3B2P48448 385 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 ATXN3P54252 364 aaPredicted RBP23.59■■□□□ 1.37
NPAS3-206ENST00000548645 MGAT5BQ3V5L5 792 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 CES3Q6UWW8 571 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 TMEM192Q8IY95 271 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 TMEM130Q8N3G9 435 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 ATXN7L3BQ96GX2 97 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 PPP1R36Q96LQ0 422 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 BIRC8Q96P09 236 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 FAF1Q9UNN5 650 aaPredicted RBP23.59■■□□□ 1.37
NPAS3-206ENST00000548645 SCN4AP35499 1836 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 ARHGEF37A1IGU5 675 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 H6PDO95479 791 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 AMHP03971 560 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 DUS1LQ6P1R4 473 aaKnown RBP23.59■■□□□ 1.37
NPAS3-206ENST00000548645 LPCAT2Q7L5N7 544 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 STRA8Q7Z7C7 330 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 CLEC14AQ86T13 490 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 TRPC4APQ8TEL6 797 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 OSBPL11Q9BXB4 747 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 NUF2Q9BZD4 464 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 OXSMQ9NWU1 459 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 AP4E1Q9UPM8 1137 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 RNF11Q9Y3C5 154 aa23.59■■□□□ 1.37
NPAS3-206ENST00000548645 PSME4Q14997 1843 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 CHRNGP07510 517 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 DPP6P42658 865 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 GOLGA7BQ2TAP0 167 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 NCBP2-AS2Q69YL0 99 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 FSTL4Q6MZW2 842 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 KHSRPQ92945 711 aaKnown RBP eCLIP23.58■■□□□ 1.37
NPAS3-206ENST00000548645 CDT1Q9H211 546 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 ZNF385DQ9H6B1 395 aa23.58■■□□□ 1.37
NPAS3-206ENST00000548645 INCA1Q0VD86 236 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 SH3D19Q5HYK7 790 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 JADE1Q6IE81 842 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 PMF1Q6P1K2 205 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 POTEHQ6S545 545 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 CNTD1Q8N815 330 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 HPDLQ96IR7 371 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 ZNF597Q96LX8 424 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 DRC3Q9H069 523 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 PRDM16Q9HAZ2 1276 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 ANK1P16157 1881 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 SSC5DA1L4H1 1573 aa23.58■■□□□ 1.36
NPAS3-206ENST00000548645 LACTBL1A8MY62 500 aa23.57■■□□□ 1.36
NPAS3-206ENST00000548645 INO80B-WBP1J3KQ70 363 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms