RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TMEM25Q86YD3 366 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 TP53INP2Q8IXH6 220 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 CCDC105Q8IYK2 499 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 CCDC33Q8N5R6 958 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 BHMTQ93088 406 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 KXD1Q9BQD3 176 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 NOL6Q9H6R4 1146 aaKnown RBP29.52■■■□□ 2.32
BRF1-213ENST00000548421 PCYOX1Q9UHG3 505 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 TBC1D30Q9Y2I9 924 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 HACD1B0YJ81 288 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 RAMP2O60895 175 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 ITGAVP06756 1048 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 SP100P23497 879 aaPredicted RBP29.51■■■□□ 2.31
BRF1-213ENST00000548421 KCNJ1P48048 391 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 LEXMQ3ZCV2 418 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 RNF43Q68DV7 783 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 CARNMT1Q8N4J0 409 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 DEPDC1BQ8WUY9 529 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 ASIC4Q96FT7 647 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 P2RY11Q96G91 374 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 SLC39A8Q9C0K1 460 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 MARK1Q9P0L2 795 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 ZNF148Q9UQR1 794 aa29.51■■■□□ 2.31
BRF1-213ENST00000548421 DRG1Q9Y295 367 aaKnown RBP29.51■■■□□ 2.31
BRF1-213ENST00000548421 SHROOM3Q8TF72 1996 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 EFCAB8A8MWE9 144 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 H0Y626 953 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 DFFAO00273 331 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 PENKP01210 267 aaPredicted RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 PSMC3P17980 439 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 GARSP41250 739 aaKnown RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 YBEYP58557 167 aaPredicted RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 CDH18Q13634 790 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 PDGFRLQ15198 375 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 PARP15Q460N3 678 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 LY6G5CQ5SRR4 150 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 DARS2Q6PI48 645 aaKnown RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 CDKL3Q8IVW4 592 aaPredicted RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 MFN1Q8IWA4 741 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 CCDC117Q8IWD4 279 aaPredicted RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 YAF2Q8IY57 180 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 ATL2Q8NHH9 583 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 CCDC26Q8TAB7 109 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 GRK7Q8WTQ7 553 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 TFB1MQ8WVM0 346 aaKnown RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 CCDC114Q96M63 670 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 QKIQ96PU8 341 aaKnown RBP eCLIP29.5■■■□□ 2.31
BRF1-213ENST00000548421 BBS2Q9BXC9 721 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 PLA2G2FQ9BZM2 168 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 BRD8Q9H0E9 1235 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 AMACRQ9UHK6 382 aa29.5■■■□□ 2.31
BRF1-213ENST00000548421 FEZ2Q9UHY8 353 aaPredicted RBP29.5■■■□□ 2.31
BRF1-213ENST00000548421 NFATC1O95644 943 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 RHOCP08134 193 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 LMNB2Q03252 620 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 DHX34Q14147 1143 aaKnown RBP29.49■■■□□ 2.31
BRF1-213ENST00000548421 POLD3Q15054 466 aaPredicted RBP29.49■■■□□ 2.31
BRF1-213ENST00000548421 ANO4Q32M45 955 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 SLC45A4Q5BKX6 768 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 TRIM68Q6AZZ1 485 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 CXorf57Q6NSI4 855 aaKnown RBP29.49■■■□□ 2.31
BRF1-213ENST00000548421 ATP2A3Q93084 1043 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 HDAC11Q96DB2 347 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 ZFYVE19Q96K21 471 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 FAM83CQ9BQN1 747 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 PLK2Q9NYY3 685 aa29.49■■■□□ 2.31
BRF1-213ENST00000548421 ILVBLA1L0T0 632 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 BCLAF3A2AJT9 711 aaKnown RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 ARHGAP42A6NI28 874 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 RASA4BC9J798 803 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 ANHXE9PGG2 379 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 NEDD8-MDP1E9PL57 170 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 RASA4O43374 803 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 TUBB4BP68371 445 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 DR1Q01658 176 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 HTR4Q13639 388 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 DHCR24Q15392 516 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 SMAD2Q15796 467 aaKnown RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 C8orf74Q6P047 294 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 RHBDF2Q6PJF5 856 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 LRRC49Q8IUZ0 686 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 ATPAF2Q8N5M1 289 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 CCNYQ8ND76 341 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 SLCO2A1Q92959 643 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 LGMNQ99538 433 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 TMEM121Q9BTD3 319 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 PHF7Q9BWX1 381 aaPredicted RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 MAGEH1Q9H213 219 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 ADH1CP00326 375 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 CYP17A1P05093 508 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 PAPOLAP51003 745 aaKnown RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 GNA12Q03113 381 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 PPIDQ08752 370 aaKnown RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 GRM2Q14416 872 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 PRKD1Q15139 912 aaPredicted RBP29.48■■■□□ 2.31
BRF1-213ENST00000548421 ZNF783Q6ZMS7 281 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 MAATS1Q7Z4T9 603 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 HMCESQ96FZ2 354 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 NUMBLQ9Y6R0 609 aa29.48■■■□□ 2.31
BRF1-213ENST00000548421 CFAP69A5D8W1 941 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms