RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PSMA2P25787 234 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ADKP55263 362 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ST8SIA6P61647 398 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ECT2LQ008S8 904 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 NRG1Q02297 640 aaPredicted RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 SCAPQ12770 1279 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 CAMK2GQ13555 558 aaPredicted RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 MAP7D1Q3KQU3 841 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 FAM72AQ5TYM5 149 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 MANEALQ5VSG8 457 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 RNF219Q5W0B1 726 aaPredicted RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 FAM72DQ6L9T8 149 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ALKBH5Q6P6C2 394 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 TFAP2DQ7Z6R9 452 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 SLFN11Q7Z7L1 901 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 FAM72BQ86X60 149 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 PPP1R9BQ96SB3 815 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ZYG11BQ9C0D3 744 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 DUSP15Q9H1R2 295 aaPredicted RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 PPARGC1AQ9UBK2 798 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 GMEB2Q9UKD1 530 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 OR51B4Q9Y5P0 310 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 SCINQ9Y6U3 715 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 SPAG17Q6Q759 2223 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 WDR87Q6ZQQ6 2873 aa19.26■□□□□ 0.67
PRPF40B-206ENST00000547764 ABCA7Q8IZY2 2146 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 MFAP3LO75121 409 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SRPRAP08240 638 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 DESP17661 470 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 COPAP53621 1224 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SULT2A1Q06520 285 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNF252P-AS1Q0IIN9 211 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 TBX2Q13207 712 aaPredicted RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 BYSLQ13895 437 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 CCDC122Q5T0U0 273 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 KIAA1324Q6UXG2 1013 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SETD3Q86TU7 594 aaPredicted RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 TMPRSS6Q8IU80 811 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 KDM1BQ8NB78 822 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SPACA7Q96KW9 195 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 RPL10LQ96L21 214 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 THAP2Q9H0W7 228 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 MTG2Q9H4K7 406 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 PRDM16Q9HAZ2 1276 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 MRPL47Q9HD33 250 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 PRSS16Q9NQE7 514 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 ABHD10Q9NUJ1 306 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNHIT6Q9NWK9 470 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNF212Q9UDV6 495 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SUN2Q9UH99 717 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 SLCO3A1Q9UIG8 710 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 NENFQ9UMX5 172 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 FRYLO94915 3013 aa19.25■□□□□ 0.67
PRPF40B-206ENST00000547764 LRIG2O94898 1065 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 RETP07949 1114 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 RHOCP08134 193 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 OR1E1P30953 314 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 STK19P49842 368 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 GFPT1Q06210 699 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 TSR1Q2NL82 804 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 C11orf74Q86VG3 221 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 PYROXD2Q8N2H3 581 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 ARFGAP1Q8N6T3 406 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 OR2T3Q8NH03 318 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 MUC3BQ9H195 1237 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 CD93Q9NPY3 652 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 MBD1Q9UIS9 605 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 VPS28Q9UK41 221 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 FZD10Q9ULW2 581 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 DOCK4Q8N1I0 1966 aa19.24■□□□□ 0.67
PRPF40B-206ENST00000547764 GVINP1Q7Z2Y8 2422 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 TTC34A8MYJ7 566 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNF217O75362 1048 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 RHOBTB1O94844 696 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 AIF1P55008 147 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 ELF2Q15723 593 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 ASTE1Q2TB18 679 aaPredicted RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 HNRNPA1L2Q32P51 320 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 EFHC2Q5JST6 749 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 C6orf118Q5T5N4 469 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 PMS2CLQ68D20 193 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 RWDD4Q6NW29 188 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 METTL3Q86U44 580 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 PRCCQ92733 491 aaPredicted RBP19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 SIPA1Q96FS4 1042 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 LOXL4Q96JB6 756 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 CHP1Q99653 195 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 CYP8B1Q9UNU6 501 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 NEU3Q9UQ49 428 aa19.23■□□□□ 0.67
PRPF40B-206ENST00000547764 IGHV1OR15-9A0A0B4J2B8 117 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 A0A0D9SEW6 157 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 SSU72P8A0A1W2PR75 194 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 AKR1B15C9JRZ8 316 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 MAP3K13O43283 966 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 CYP1A2P05177 515 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 L1CAMP32004 1257 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 GALCP54803 685 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 SLC18A3Q16572 532 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms