RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KIF5CO60282 957 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 PALMO75781 387 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 KAT7O95251 611 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SLC2A3P11169 496 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 COMTP21964 271 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 MIPP30301 263 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 CCR1P32246 355 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 PCK1P35558 622 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 GJC1P36383 396 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SLC1A1P43005 524 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 CXCR3P49682 368 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SEC13P55735 322 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 GAD2Q05329 585 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 RING1Q06587 406 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 HADHQ16836 314 aaKnown RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 CPNE8Q86YQ8 564 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SYT12Q8IV01 421 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 CEP76Q8TAP6 659 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SLC39A13Q96H72 371 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 TPSD1Q9BZJ3 242 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 WDCPQ9H6R7 721 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 ARHGEF4Q9NR80 690 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 KCND1Q9NSA2 647 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC7-226ENST00000547259 CFAP97Q9P2B7 532 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 PCSK1NQ9UHG2 260 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 HYOU1Q9Y4L1 999 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 STC2O76061 302 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 IGLV3-27P01718 113 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 CYP17A1P05093 508 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ADH5P11766 374 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 TNNT1P13805 278 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 MSNP26038 577 aaKnown RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 P2RY2P41231 377 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 HARS2P49590 506 aaKnown RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ARL13BQ3SXY8 428 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ZFYVE27Q5T4F4 411 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 NAIF1Q69YI7 327 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 SLC36A4Q6YBV0 504 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 PEX26Q7Z412 305 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 UNC45BQ8IWX7 931 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 PGBD3Q8N328 593 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 CCDC33Q8N5R6 958 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ARFGAP1Q8N6T3 406 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 CCDC185Q8N715 623 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ATP6V0D2Q8N8Y2 350 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 LRRC57Q8N9N7 239 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 MDGA1Q8NFP4 955 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 PIGKQ92643 395 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 DCLK3Q9C098 648 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.41
HDAC7-226ENST00000547259 SLC12A6Q9UHW9 1150 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 AMFRQ9UKV5 643 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 ALG6Q9Y672 507 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
HDAC7-226ENST00000547259 TBC1D3BA6NDS4 549 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 KLF8O95600 359 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 FTCDO95954 541 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 TCF4P15884 667 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ATXN3P54252 364 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 AIF1P55008 147 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 TAS2R40P59535 323 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 IRX4P78413 519 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ZXDBP98169 803 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 HNRNPDQ14103 355 aaKnown RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 EFHC2Q5JST6 749 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ZNF569Q5MCW4 686 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SDE2Q6IQ49 451 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ZSCAN30Q86W11 494 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 DENND1CQ8IV53 801 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 ALLCQ8N6M5 410 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 IL17RCQ8NAC3 791 aa12.45□□□□□ -0.42
HDAC7-226ENST00000547259 KDF1Q8NAX2 398 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 TXNDC5Q8NBS9 432 aaKnown RBP12.45□□□□□ -0.42
HDAC7-226ENST00000547259 WBP2Q969T9 261 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms