RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SERPINA13PQ6UXR4 307 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 PSTKQ8IV42 348 aaKnown RBP17.29■□□□□ 0.36
LTBR-215ENST00000546296 CAMKK1Q8N5S9 505 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 RFFLQ8WZ73 363 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 HSPH1Q92598 858 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 FEM1AQ9BSK4 669 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 RETREG1Q9H6L5 497 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 VPS28Q9UK41 221 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 INTS6Q9UL03 887 aaKnown RBP17.29■□□□□ 0.36
LTBR-215ENST00000546296 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 WASH3PC4AMC7 463 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 K7ESF4 209 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 SYNCRIPO60506 623 aaKnown RBP17.28■□□□□ 0.36
LTBR-215ENST00000546296 ALDH1A2O94788 518 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 ARHGAP25P42331 645 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 IL12RB1P42701 662 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 PXNP49023 591 aaPredicted RBP17.28■□□□□ 0.36
LTBR-215ENST00000546296 PLK1P53350 603 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 TPI1P60174 286 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 ECT2LQ008S8 904 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 SULT2A1Q06520 285 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 STARD3Q14849 445 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 CA9Q16790 459 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 SMTNL2Q2TAL5 461 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 PPP6R3Q5H9R7 873 aaPredicted RBP17.28■□□□□ 0.36
LTBR-215ENST00000546296 KCNT1Q5JUK3 1230 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 TMEM92Q6UXU6 159 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 ANP32BQ92688 251 aaKnown RBP17.28■□□□□ 0.36
LTBR-215ENST00000546296 ERLEC1Q96DZ1 483 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 GABRG3Q99928 467 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 SPON2Q9BUD6 331 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 FAM126AQ9BYI3 521 aaPredicted RBP17.28■□□□□ 0.36
LTBR-215ENST00000546296 CATSPERBQ9H7T0 1116 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 DNAI1Q9UI46 699 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 ERVW-1Q9UQF0 538 aa17.28■□□□□ 0.36
LTBR-215ENST00000546296 ZNF318Q5VUA4 2279 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 ILVBLA1L0T0 632 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 EEF2KO00418 725 aaKnown RBP17.27■□□□□ 0.36
LTBR-215ENST00000546296 MTA2O94776 668 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 TCF4P15884 667 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 IL1R2P27930 398 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 HTR7P34969 479 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 GJC1P36383 396 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 NNMTP40261 264 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 CTSOP43234 321 aaPredicted RBP17.27■□□□□ 0.36
LTBR-215ENST00000546296 MAPKAPK2P49137 400 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 FNTBP49356 437 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 MRE11P49959 708 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 KRT83P78385 493 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 ARTNQ5T4W7 220 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 KIAA1328Q86T90 577 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 TMEM139Q8IV31 216 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 PGBD3Q8N328 593 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 OR52K2Q8NGK3 314 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 ATRIPQ8WXE1 791 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 KCTD15Q96SI1 283 aaPredicted RBP17.27■□□□□ 0.36
LTBR-215ENST00000546296 TMEM248Q9NWD8 314 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 ZSCAN32Q9NX65 697 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 BCCIPQ9P287 314 aaKnown RBP eCLIP17.27■□□□□ 0.36
LTBR-215ENST00000546296 TFR2Q9UP52 801 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 RAD54BQ9Y620 910 aa17.27■□□□□ 0.36
LTBR-215ENST00000546296 TCRBV21S2A2A0A5A6 115 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 FGF10O15520 208 aaPredicted RBP17.26■□□□□ 0.35
LTBR-215ENST00000546296 EPHX1P07099 455 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 SRPRAP08240 638 aaKnown RBP17.26■□□□□ 0.35
LTBR-215ENST00000546296 RARAP10276 462 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 TDGF1P13385 188 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 PRKCHP24723 683 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 HOXA6P31267 233 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 HOXC13P31276 330 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 MAN1A1P33908 653 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 GNA12Q03113 381 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 DMWDQ09019 674 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 SEMA3BQ13214 749 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 KRT81Q14533 505 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 TCEAL1Q15170 157 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 PTPRNQ16849 979 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 ZFYVE27Q5T4F4 411 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 ANO7Q6IWH7 933 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 ZNF783Q6ZMS7 281 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 CYP4V2Q6ZWL3 525 aaPredicted RBP17.26■□□□□ 0.35
LTBR-215ENST00000546296 NLRP14Q86W24 1093 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 ACRBPQ8NEB7 543 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 TEKT4Q8WW24 435 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 HMGB4Q8WW32 186 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 ALG14Q96F25 216 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 RPL10LQ96L21 214 aaKnown RBP17.26■□□□□ 0.35
LTBR-215ENST00000546296 C2orf49Q9BVC5 232 aaPredicted RBP17.26■□□□□ 0.35
LTBR-215ENST00000546296 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.26■□□□□ 0.35
LTBR-215ENST00000546296 DONSONQ9NYP3 566 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 SUN2Q9UH99 717 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 SLC25A13Q9UJS0 675 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 OR51B4Q9Y5P0 310 aa17.26■□□□□ 0.35
LTBR-215ENST00000546296 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 A0A1W2PQF6 199 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 H3BRJ5 948 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 HLA-EP13747 358 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ETFBP38117 255 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ARL4AP40617 200 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms