RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ZNF304Q9HCX3 659 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GIMAP4Q9NUV9 329 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 IP6K2Q9UHH9 426 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 TCEAL9Q9UHQ7 104 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 FARP1Q9Y4F1 1045 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 CLUHO75153 1309 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 LOC100653049A0A140TA62 436 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 E5RJQ4 531 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 NFKBIEO00221 500 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 KRT34O76011 436 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ATF7P17544 494 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 PRKACAP17612 351 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MX2P20592 715 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 CXCR2P25025 360 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 CDKN2BP42772 138 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 NME3Q13232 169 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MORF4L2Q15014 288 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 CDONQ4KMG0 1287 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 OGFRL1Q5TC84 451 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 AGAP9Q5VTM2 703 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 IGFN1Q86VF2 1251 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ARID3BQ8IVW6 561 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 WDTC1Q8N5D0 677 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 LSMEM1Q8N8F7 131 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 REPS2Q8NFH8 660 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 NKD2Q969F2 451 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 C8orf48Q96LL4 319 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MCEEQ96PE7 176 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 TMEM121Q9BTD3 319 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MRPL9Q9BYD2 267 aaKnown RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 JPH1Q9HDC5 661 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 ZNF277Q9NRM2 450 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 RBAKQ9NYW8 714 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 RAB26Q9ULW5 256 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 DRG1Q9Y295 367 aaKnown RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 A0A0G2JMZ2 1700 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 WDR90Q96KV7 1748 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 FAM189A1O60320 539 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 KRT1P04264 644 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ITGAVP06756 1048 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 PSAPP07602 524 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 GLRA2P23416 452 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 CCND2P30279 289 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 GDF10P55107 478 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ACTR2P61160 394 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 PRAMEP78395 509 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 SP2Q02086 613 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MTM1Q13496 603 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 EMC2Q15006 297 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 MSS51Q4VC12 460 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 SEZ6Q53EL9 994 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 AARS2Q5JTZ9 985 aaKnown RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 XRRA1Q6P2D8 792 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 DENND5BQ6ZUT9 1274 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 BTLAQ7Z6A9 289 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 DSG4Q86SJ6 1040 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 NLRP7Q8WX94 980 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 TMEM143Q96AN5 459 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ATG4CQ96DT6 458 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 TCF12Q99081 682 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 CGRRF1Q99675 332 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 DHRS4Q9BTZ2 278 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 ZNF395Q9H8N7 513 aaPredicted RBP8.05□□□□□ -1.12
UBR1-202ENST00000546274 FANCEQ9HB96 536 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 WDR70Q9NW82 654 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 POMPQ9Y244 141 aa8.05□□□□□ -1.12
UBR1-202ENST00000546274 A0A0B4J269 797 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 CCDC195A0A1B0GUA6 201 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 CAPN14A8MX76 684 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 PRKCAP17252 672 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 MRPS22P82650 360 aaKnown RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 PPP2R2BQ00005 443 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 SP4Q02446 784 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 PPP6R3Q5H9R7 873 aaPredicted RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 EFHC2Q5JST6 749 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 LRRC38Q5VT99 294 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 ANKRD22Q5VYY1 191 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 KYAT3Q6YP21 454 aaKnown RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 CPSF7Q8N684 471 aaKnown RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 ATP6V0D2Q8N8Y2 350 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 SLC35B2Q8TB61 432 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 VPS35Q96QK1 796 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 OLFM1Q99784 485 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 TRIM39Q9HCM9 518 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 RNF146Q9NTX7 359 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 NDFIP2Q9NV92 336 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 SAE1Q9UBE0 346 aaPredicted RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 H3BNX3 289 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 ZMPSTE24O75844 475 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 EGFRP00533 1210 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 PRDX6P30041 224 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 PDIA2Q13087 525 aaKnown RBP8.04□□□□□ -1.12
UBR1-202ENST00000546274 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 TFDP3Q5H9I0 405 aa8.04□□□□□ -1.12
UBR1-202ENST00000546274 FNBP1LQ5T0N5 605 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms