RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 GOLGA8TH3BQL2 631 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 GIPC1O14908 333 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 LIG4P49917 911 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 RPS3AP61247 264 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 ART3Q13508 389 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 XKR5Q6UX68 686 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TFAP2CQ92754 450 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TDRD1Q9BXT4 1180 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 SEMA6AQ9H2E6 1030 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 B3GNT3Q9Y2A9 372 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TSC22D4Q9Y3Q8 395 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 STYXL1Q9Y6J8 313 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 BCLAF3A2AJT9 711 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 PLOD2O00469 737 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TRIM38O00635 465 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 RPS12P25398 132 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 EIF2B2P49770 351 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 BMXP51813 675 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 RHDQ02161 417 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 NIPAL4Q0D2K0 466 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 RGS21Q2M5E4 152 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TKFCQ3LXA3 575 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 PTPN20Q4JDL3 420 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 FAM182AQ5T1J6 154 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 SNRNP48Q6IEG0 339 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TRIM50Q86XT4 487 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TRUB1Q8WWH5 349 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 LRTOMTQ8WZ04 291 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 UHRF1Q96T88 793 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 ZNF385DQ9H6B1 395 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 GID8Q9NWU2 228 aa16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 DUS2Q9NX74 493 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 AGO2Q9UKV8 859 aaKnown RBP16.9■□□□□ 0.3
CLPTM1-203ENST00000546079 STX16-NPEPL1H3BU86 382 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 ICAM1P05362 532 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.291e-8■■□□□ 13.2
CLPTM1-203ENST00000546079 RBL1P28749 1068 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 ITGA7Q13683 1181 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 ATP1A4Q13733 1029 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 DEPDC1Q5TB30 811 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 SLC2A7Q6PXP3 512 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 EEPD1Q7L9B9 569 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 TDRD5Q8NAT2 981 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 TNIP2Q8NFZ5 429 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 CDKL2Q92772 493 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 CGREF1Q99674 301 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 GIN1Q9NXP7 522 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 HESX1Q9UBX0 185 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 UBIAD1Q9Y5Z9 338 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 SLC30A1Q9Y6M5 507 aa16.89■□□□□ 0.29
CLPTM1-203ENST00000546079 TMX2-CTNND1H3BSU7 103 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 CNOT3O75175 753 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TPSB2P20231 275 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 ADORA2AP29274 412 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 PSMD8P48556 350 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 HSD17B4P51659 736 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 CDH6P55285 790 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TRIM25Q14258 630 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TPSAB1Q15661 275 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 ZNF354CQ86Y25 554 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 CPNE9Q8IYJ1 553 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 EMC1Q8N766 993 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 STON2Q8WXE9 905 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 DUS3LQ96G46 650 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 NPLQ9BXD5 320 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 SUCOQ9UBS9 1254 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 ERGIC3Q9Y282 383 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 A0A1W2PPW3 197 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 DGKIO75912 1065 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 CSPG5O95196 566 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 ATG7O95352 703 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 JAK3P52333 1124 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 SOX10P56693 466 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 NAB1Q13506 487 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 DGKZQ13574 1117 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 FGD3Q5JSP0 725 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 EGFLAMQ63HQ2 1017 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 PPP4R4Q6NUP7 873 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 PLD5Q8N7P1 536 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 CNTD1Q8N815 330 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 OR5B17Q8NGF7 314 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 ZSCAN18Q8TBC5 510 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 RNF157Q96PX1 679 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 TRPV6Q9H1D0 765 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 WDR55Q9H6Y2 383 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 MRPL40Q9NQ50 206 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 NCKIPSDQ9NZQ3 722 aa16.88■□□□□ 0.29
CLPTM1-203ENST00000546079 GOLGA8QA0A0J9YX86 632 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms