RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ANXA11P50995 505 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 RTP1P59025 263 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 KHDRBS2Q5VWX1 349 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 SLC24A5Q71RS6 500 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 EPM2AIP1Q7L775 607 aaPredicted RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 SLC35G2Q8TBE7 412 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 RSPH1Q8WYR4 309 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 CXorf40BQ96DE9 158 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 MS4A14Q96JA4 679 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 CNPY3Q9BT09 278 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 OXCT2Q9BYC2 517 aaPredicted RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 HSD3B7Q9H2F3 369 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 AP4E1Q9UPM8 1137 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TNFSF13BQ9Y275 285 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 R3HDM2Q9Y2K5 976 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 TDRKHQ9Y2W6 561 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3DA0A087WVF3 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3IA0A087WXS9 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3EA0A087X179 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3KA0A087X1G2 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 RNF103-CHMP3A0A140T963 221 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ANO9A1A5B4 782 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3FA6NER0 549 aaPredicted RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3LB9A6J9 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ANGPT2O15123 496 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3HP0C7X1 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 MTM1Q13496 603 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 KYNUQ16719 465 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3GQ6DHY5 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3CQ6IPX1 549 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TBC1D3Q8IZP1 549 aaPredicted RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 PRMT1Q99873 361 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 PACSIN1Q9BY11 444 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 GULP1Q9UBP9 304 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 RPN2P04844 631 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 APODP05090 189 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 KRT4P19013 534 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 PSMA3P25788 255 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 MCL1Q07820 350 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ZBTB17Q13105 803 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 HIC1Q14526 733 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 CYP4X1Q8N118 509 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 DACH2Q96NX9 599 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ELOVL2Q9NXB9 296 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ATXN2Q99700 1313 aaKnown RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 A0A0B4J269 797 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 MOXD2PA6NHM9 499 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 F8VZ95 297 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 FAM153BP0C7A2 387 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 ADSSP30520 456 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 LBX1P52954 281 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 ACLYP53396 1101 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 ESRRGP62508 458 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 FAM153CQ494X1 144 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 ZCWPW2Q504Y3 356 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 WSCD1Q658N2 575 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 C4orf22Q6V702 233 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 COLGALT2Q8IYK4 626 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 AENQ8WTP8 325 aaKnown RBP8.77□□□□□ -1
CLIP1-218ENST00000545889 FAM136AQ96C01 138 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 ZNF518BQ9C0D4 1074 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 GPATCH2LQ9NWQ4 482 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 FAM153AQ9UHL3 310 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 PCDHA2Q9Y5H9 948 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 CEP290O15078 2479 aa8.77□□□□□ -1
CLIP1-218ENST00000545889 SMIM35A0A1B0GVV1 85 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 EVPLLA8MZ36 301 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 FKBP9O95302 570 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 CHN1P15882 459 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 TGM2P21980 687 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 CNTN1Q12860 1018 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PEX6Q13608 980 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MOGSQ13724 837 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 BOP1Q14137 746 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PCBP1Q15365 356 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MAPRE2Q15555 327 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 TARBP2Q15633 366 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 FKBP9P1Q75LS8 142 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 ZNF571Q7Z3V5 609 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 SLC44A2Q8IWA5 706 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 RXFP2Q8WXD0 754 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 USP6NLQ92738 828 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PHF21AQ96BD5 680 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 PAWRQ96IZ0 340 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 DNAJC1Q96KC8 554 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 EIF2AQ9BY44 585 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 LACRTQ9GZZ8 138 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 ZDHHC6Q9H6R6 413 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 EBF2Q9HAK2 575 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 GOLGA2P5Q9HBQ8 144 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 MRPL40Q9NQ50 206 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 RIC8BQ9NVN3 520 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 XPO7Q9UIA9 1087 aaKnown RBP8.77□□□□□ -1.01
CLIP1-218ENST00000545889 DNMT3LQ9UJW3 386 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
CLIP1-218ENST00000545889 SSU72P8A0A1W2PR75 194 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms