RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ADAM23O75077 832 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 ALDH1A2O94788 518 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 EPN2O95208 641 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 KLF8O95600 359 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 PF4P02776 101 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 KRT5P13647 590 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 LCP1P13796 627 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TGM1P22735 817 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 MAOBP27338 520 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 HOXC13P31276 330 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 MTIF2P46199 727 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 ID4P47928 161 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 PXNP49023 591 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 MFAP3P55082 362 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TPD52L1Q16890 204 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 EXOC3L4Q17RC7 722 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 FYB2Q5VWT5 728 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 ANO7Q6IWH7 933 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 PMF1Q6P1K2 205 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 RBM43Q6ZSC3 357 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 TPGS1Q6ZTW0 290 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 FMNL3Q8IVF7 1028 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TRIM42Q8IWZ5 723 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 CCDC33Q8N5R6 958 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 ZNF513Q8N8E2 541 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 NAT16Q8N8M0 369 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 GOLM1Q8NBJ4 401 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TXNDC5Q8NBS9 432 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 MDGA1Q8NFP4 955 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 SHC3Q92529 594 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 GOLGA1Q92805 767 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TRIM56Q9BRZ2 755 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 CRACR2AQ9BSW2 395 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TRIM62Q9BVG3 475 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 ACBD3Q9H3P7 528 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 PARD6AQ9NPB6 346 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 UBE2TQ9NPD8 197 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 LMBRD1Q9NUN5 540 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 POLR3BQ9NW08 1133 aaPredicted RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 STOML2Q9UJZ1 356 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 AGO1Q9UL18 857 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 TLR6Q9Y2C9 796 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 SLC27A6Q9Y2P4 619 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 PCDHGA5Q9Y5G8 931 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 ASCC3Q8N3C0 2202 aaKnown RBP8□□□□□ -1.13
SNHG1-223ENST00000545440 NUMA1Q14980 2115 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 TMEM131Q92545 1883 aa8□□□□□ -1.13
SNHG1-223ENST00000545440 BECN2A8MW95 431 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 PRR5-ARHGAP8B1AHC4 643 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 PAGE1O75459 146 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 IGLV3-27P01718 113 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 LTFP02788 710 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 CYBBP04839 570 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 HMBSP08397 361 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SLC9A1P19634 815 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SDHBP21912 280 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 EEF1GP26641 437 aaKnown RBP7.99□□□□□ -1.13
SNHG1-223ENST00000545440 PON1P27169 355 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 GPD2P43304 727 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 ACADSBP45954 432 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 HARS2P49590 506 aaKnown RBP7.99□□□□□ -1.13
SNHG1-223ENST00000545440 RGS7P49802 495 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 ARHGAP8P85298 464 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 ARID5AQ03989 594 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 RING1Q06587 406 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SETDB1Q15047 1291 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 EIF4HQ15056 248 aaKnown RBP7.99□□□□□ -1.13
SNHG1-223ENST00000545440 ELF2Q15723 593 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 CSRP2Q16527 193 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 PLK5Q496M5 336 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 NUGGCQ68CJ6 796 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 BEND5Q7L4P6 421 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 KBTBD6Q86V97 674 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 CREBRFQ8IUR6 639 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 DENND1CQ8IV53 801 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 OLIG1Q8TAK6 271 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SREK1Q8WXA9 508 aaKnown RBP7.99□□□□□ -1.13
SNHG1-223ENST00000545440 NDRG1Q92597 394 aaKnown RBP7.99□□□□□ -1.13
SNHG1-223ENST00000545440 RMDN1Q96DB5 314 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SIX2Q9NPC8 291 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 SEMA4GQ9NTN9 838 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 DLL3Q9NYJ7 618 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 FBXO10Q9UK96 956 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 USP18Q9UMW8 372 aa7.99□□□□□ -1.13
SNHG1-223ENST00000545440 TCRBV21S2A2A0A5A6 115 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 ANTXRLA6NF34 631 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 KCNJ18B7U540 433 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 PRRT4C9JH25 899 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 GFRA2O00451 464 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 NPC1O15118 1278 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 TRIM24O15164 1050 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 MSI1O43347 362 aaKnown RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 THAP12O43422 761 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 RHOBTB1O94844 696 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 LETM1O95202 739 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-223ENST00000545440 CALCAP01258 141 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 CISD3P0C7P0 127 aa7.98□□□□□ -1.13
SNHG1-223ENST00000545440 HOXB2P14652 356 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms