RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 GZMAP12544 262 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 NDUFV2P19404 249 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 MMP8P22894 467 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 HLA-FP30511 346 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 OR1E1P30953 314 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CSKP41240 450 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 IL12RB1P42701 662 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PTPN9P43378 593 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 MAPKAPK2P49137 400 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CXCR3P49682 368 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PLK1P53350 603 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 GSCP56915 257 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 JAM2P57087 298 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 RPS24P62847 133 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 NOMO3P69849 1222 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CENPCQ03188 943 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ZNF33AQ06730 810 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SLC14A1Q13336 389 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CAMK2GQ13555 558 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ENPP2Q13822 863 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 AUHQ13825 339 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ELAVL3Q14576 367 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SUZ12Q15022 739 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 GEN1Q17RS7 908 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CLEC16AQ2KHT3 1053 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 HNRNPA1L2Q32P51 320 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 INAVAQ3KP66 663 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PLEKHG6Q3KR16 790 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 FUT11Q495W5 492 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PTPN20Q4JDL3 420 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 FAM133BQ5BKY9 247 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 FIGNQ5HY92 759 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PITRM1Q5JRX3 1037 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 EFHC2Q5JST6 749 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SYPL2Q5VXT5 272 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 NAIF1Q69YI7 327 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PKN3Q6P5Z2 889 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 TMEM92Q6UXU6 159 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 MMS22LQ6ZRQ5 1243 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 KIAA0907Q7Z7F0 614 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ZSCAN30Q86W11 494 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ZNF354CQ86Y25 554 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PHF13Q86YI8 300 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 WDTC1Q8N5D0 677 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 OR8D1Q8WZ84 308 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SYN2Q92777 582 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 GATA6Q92908 595 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 NT5C3BQ969T7 300 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ZYG11BQ9C0D3 744 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 GANQ9H2C0 597 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 KDM4CQ9H3R0 1056 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CATSPERBQ9H7T0 1116 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 RTN4Q9NQC3 1192 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ITM2CQ9NQX7 267 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 RXFP3Q9NSD7 469 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ARHGEF38Q9NXL2 777 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 TMEM63CQ9P1W3 806 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 USP36Q9P275 1121 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 OR12D3Q9UGF7 316 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CYTH4Q9UIA0 394 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SLC6A14Q9UN76 642 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 CYP8B1Q9UNU6 501 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 ERVW-1Q9UQF0 538 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 SIK3Q9Y2K2 1263 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 COL4A2P08572 1712 aa5.77□□□□□ -1.49
CLSTN3-215ENST00000544584 MYOFQ9NZM1 2061 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 A0A1B0GTH6 734 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 A0A1B0GTW7 788 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 GOLGA6L7A0A1B0GV03 622 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 ILVBLA1L0T0 632 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SYCE3A1L190 88 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 YKT6O15498 198 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 FGF10O15520 208 aaPredicted RBP5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SLC7A4O43246 635 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 DAPK3O43293 454 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 PAGE1O75459 146 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 CALCAP01258 141 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 IGLV3-19P01714 112 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 PRNPP04156 253 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 FYNP06241 537 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SERPINF2P08697 491 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 UNGP13051 313 aaPredicted RBP5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 ATP1A3P13637 1013 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 GPD1P21695 349 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 C5AR1P21730 350 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SLC6A4P31645 630 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 WASP42768 502 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 TPMTP51580 245 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 AFF3P51826 1226 aaKnown RBP5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 FMO1Q01740 532 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 NRG1Q02297 640 aaPredicted RBP5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 APBA1Q02410 837 aa5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 SRSF5Q13243 272 aaKnown RBP5.76□□□□□ -1.49
CLSTN3-215ENST00000544584 GRM3Q14832 879 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms