RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 UBA6A0AVT1 1052 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 B4GALT4O60513 344 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 ETV4P43268 484 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 SLC10A2Q12908 348 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 ANO4Q32M45 955 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 PITRM1Q5JRX3 1037 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 SSU72Q9NP77 194 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 LZTS1Q9Y250 596 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 TMEM233B4DJY2 109 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 LTFP02788 710 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 ZNF132P52740 706 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 CHN2P52757 468 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 BCAT1P54687 386 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 NIPA2Q8N8Q9 360 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 GPR20Q99678 358 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 R3HDMLQ9H3Y0 253 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 NXF3Q9H4D5 531 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
PCMTD1-208ENST00000544451 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 NEMP2A6NFY4 417 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 CCL22O00626 93 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 RECQL4O94761 1208 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 STBD1O95210 358 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 HMBSP08397 361 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 UQCRBP14927 111 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 NFKB1P19838 968 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 PIK3R1P27986 724 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 SLC18A1P54219 525 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 TNIP3Q96KP6 325 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 SIGLEC10Q96LC7 697 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 TMEM79Q9BSE2 394 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ADAMTS6Q9UKP5 1117 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 PSMC3P17980 439 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ERCC2P18074 760 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 FSTL4Q6MZW2 842 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 GMLQ99445 158 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 NIFKQ9BYG3 293 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 MRPL46Q9H2W6 279 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 MID2Q9UJV3 735 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 PRRC2BQ5JSZ5 2229 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 VAV1P15498 845 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 CXCR3P49682 368 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 FAM83EQ2M2I3 478 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 VPS39Q96JC1 886 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 GATA5Q9BWX5 397 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 ARHGEF38Q9NXL2 777 aa13.5□□□□□ -0.25
PCMTD1-208ENST00000544451 SPTLC1O15269 473 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 ALDOAP04075 364 aaKnown RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 ZNF470Q6ECI4 717 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 ARCQ7LC44 396 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 FBXW8Q8N3Y1 598 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 SPATA22Q8NHS9 363 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 PDCD6IPQ8WUM4 868 aaKnown RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 ZNF670Q9BS34 389 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 FICDQ9BVA6 458 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 PCDHAC1Q9H158 963 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 RPL26L1Q9UNX3 145 aaKnown RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 IQCF3P0C7M6 154 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 MCF2P10911 925 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 CYP2C9P11712 490 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 CDK7P50613 346 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 TRNP1Q6NT89 227 aa13.49□□□□□ -0.25
PCMTD1-208ENST00000544451 KLC3Q6P597 504 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms