RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GRIA3P42263 894 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 TCEA2Q15560 299 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 HLA-DQA1Q5Y7H0 255 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 AADACL2Q6P093 401 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ELOA2Q8IYF1 753 aaPredicted RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 OR7A2PQ8NGA2 310 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 OR1E1P30953 314 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 ERVK-9P63128 1117 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 SAMD4BQ5PRF9 694 aaKnown RBP15.71■□□□□ 0.1
CHD4-210ENST00000544040 C16orf59Q7L2K0 433 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 MAML3Q96JK9 1138 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.71■□□□□ 0.16e-7■■□□□ 11.5
CHD4-210ENST00000544040 SNTG2Q9NY99 539 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 KIAA1257Q9ULG3 409 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 EFR3BQ9Y2G0 817 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 ANKRD6Q9Y2G4 727 aa15.71■□□□□ 0.1
CHD4-210ENST00000544040 PSIP1O75475 530 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 FBXO21O94952 628 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 STX12Q86Y82 276 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 SLC41A1Q8IVJ1 513 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 FAM237BA0A1B0GVD1 139 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 FAM25EA8MYX2 175 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 RCVRNP35243 200 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 TUBP50607 506 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PSMD4P55036 377 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 TTC7BQ86TV6 843 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PIGUQ9H490 435 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 XPNPEP3Q9NQH7 507 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 COMMD9Q9P000 198 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 TSPAN16Q9UKR8 245 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 GSTK1Q9Y2Q3 226 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 FAM86B1E9PN63 330 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PIGNO95427 931 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 NTRK1P04629 796 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 ZSCAN5DPP0CG00 497 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 EN1Q05925 392 aaPredicted RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 TAS2R13Q9NYV9 303 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 UBA2Q9UBT2 640 aaPredicted RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 OGDHLQ9ULD0 1010 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 ZNF286BP0CG31 522 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 NFKB1P19838 968 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PDIA6Q15084 440 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 RRN3Q9NYV6 651 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PLA2G4CQ9UP65 541 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 KCNK1O00180 336 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 CD3EAPO15446 510 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 SEC24AO95486 1093 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 POMCP01189 267 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 SUPT20HL2P0C7V6 817 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 IFNGR2P38484 337 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 TOB1P50616 345 aaPredicted RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 AKR1D1P51857 326 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PEG10Q86TG7 708 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 ZC3H7AQ8IWR0 971 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 SCUBE3Q8IX30 993 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 ARL10Q8N8L6 244 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 REXO5Q96IC2 774 aaKnown RBP15.7■□□□□ 0.1
CHD4-210ENST00000544040 NUDT12Q9BQG2 462 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 SLC35C2Q9NQQ7 365 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 PCDHA3Q9Y5H8 950 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 KIF1BO60333 1816 aa15.7■□□□□ 0.1
CHD4-210ENST00000544040 ICAM1P05362 532 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 CCNA2P20248 432 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 TMEM63BQ5T3F8 832 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 DET1Q7L5Y6 550 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ANKRD27Q96NW4 1050 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 PGLYRP2Q96PD5 576 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 RPRD1BQ9NQG5 326 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 GAKO14976 1311 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 AP5Z1O43299 807 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ZBTB11O95625 1053 aaPredicted RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 LSM8O95777 96 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 THP07101 528 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 CRADDP78560 199 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 FRG1Q14331 258 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 HHIPL2Q6UWX4 724 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 SAMD7Q7Z3H4 446 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 ABRAQ8N0Z2 381 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 AGAP11Q8TF27 550 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 BTBD9Q96Q07 612 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 MYOZ2Q9NPC6 264 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 SHOC2Q9UQ13 582 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 FAM50BQ9Y247 325 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 STARD13Q9Y3M8 1113 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 PLOD3O60568 738 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 SASH3O75995 380 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 SERPINF2P08697 491 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 JAK1P23458 1154 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 NDST1P52848 882 aa15.69■□□□□ 0.1
CHD4-210ENST00000544040 INO80DQ53TQ3 878 aaPredicted RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 EIF3MQ7L2H7 374 aaKnown RBP15.69■□□□□ 0.1
CHD4-210ENST00000544040 ARMC8Q8IUR7 673 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms